The 2.0 version of rSNPBase

Variant report

Variant rs62360777
Chromosome Location chr5:108197374-108197375
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:42 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:108147000-108198800 Weak transcription Aorta Aorta
2 chr5:108147000-108208800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
3 chr5:108166400-108203200 Weak transcription HSMM muscle
4 chr5:108166600-108217000 Weak transcription Left Ventricle heart
5 chr5:108167200-108220400 Weak transcription Fetal Lung lung
6 chr5:108168200-108203800 Weak transcription Adipose Nuclei Adipose
7 chr5:108169400-108229200 Weak transcription Fetal Stomach stomach
8 chr5:108173000-108199800 Weak transcription Brain Angular Gyrus brain
9 chr5:108173400-108239800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
10 chr5:108179800-108199800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
11 chr5:108179800-108202000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
12 chr5:108182000-108217000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
13 chr5:108183800-108260400 Weak transcription Ovary ovary
14 chr5:108187200-108202600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
15 chr5:108187200-108204600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
16 chr5:108187200-108211800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
17 chr5:108187800-108199200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
18 chr5:108190600-108200000 Weak transcription Breast Myoepithelial Primary Cells Breast
19 chr5:108194000-108217000 Weak transcription Esophagus oesophagus
20 chr5:108194200-108203000 Weak transcription NHLF lung
21 chr5:108194600-108260000 Weak transcription Fetal Intestine Large intestine
22 chr5:108194800-108200000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
23 chr5:108194800-108204200 Weak transcription NHEK skin
24 chr5:108194800-108204600 Weak transcription Duodenum Smooth Muscle Duodenum
25 chr5:108194800-108207000 Weak transcription HUVEC blood vessel
26 chr5:108194800-108208600 Weak transcription Osteobl bone
27 chr5:108194800-108236200 Weak transcription Hela-S3 cervix
28 chr5:108195000-108204800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
29 chr5:108195000-108211800 Weak transcription NHDF-Ad bronchial
30 chr5:108195200-108197600 Weak transcription Fetal Brain Male brain
31 chr5:108195200-108203400 Weak transcription Primary B cells from cord blood blood
32 chr5:108195200-108204800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
33 chr5:108195200-108206600 Weak transcription Primary B cells from peripheral blood blood
34 chr5:108195200-108209000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
35 chr5:108195200-108211000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
36 chr5:108195200-108231600 Weak transcription Primary hematopoietic stem cells blood
37 chr5:108195200-108231600 Weak transcription Psoas Muscle Psoas
38 chr5:108195200-108234400 Weak transcription Muscle Satellite Cultured Cells --
39 chr5:108195400-108202600 Weak transcription Primary monocytes fromperipheralblood blood
40 chr5:108196800-108230000 Weak transcription Lung lung
41 chr5:108197000-108268200 Weak transcription Fetal Muscle Trunk muscle
42 chr5:108197200-108203600 Weak transcription Pancreas Pancrea

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Last update: Aug 31, 2015