Variant report

Variant rs12719099
Chromosome Location chr5:108138792-108138793
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:47 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:108120200-108142200 Weak transcription Aorta Aorta
2 chr5:108120600-108146400 Weak transcription Rectal Mucosa Donor 31 rectum
3 chr5:108120800-108146400 Weak transcription Rectal Mucosa Donor 29 rectum
4 chr5:108121000-108139000 Weak transcription Primary T cells from cord blood blood
5 chr5:108121000-108139200 Weak transcription Sigmoid Colon Sigmoid Colon
6 chr5:108123400-108139400 Weak transcription Primary T helper cells PMA-I stimulated --
7 chr5:108124000-108138800 Weak transcription Fetal Brain Male brain
8 chr5:108124000-108139200 Weak transcription Primary B cells from cord blood blood
9 chr5:108124200-108141600 Weak transcription Pancreas Pancrea
10 chr5:108124200-108141800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
11 chr5:108124200-108142800 Weak transcription Ovary ovary
12 chr5:108124400-108139800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
13 chr5:108124600-108146600 Weak transcription Skeletal Muscle Male skeletal muscle
14 chr5:108124800-108149400 Weak transcription Stomach Smooth Muscle stomach
15 chr5:108125200-108139200 Weak transcription Brain Hippocampus Middle brain
16 chr5:108132400-108139600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
17 chr5:108132800-108139200 Weak transcription Lung lung
18 chr5:108133200-108146600 Weak transcription Left Ventricle heart
19 chr5:108133200-108146800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
20 chr5:108133400-108138800 Weak transcription HUES64 Cell Line embryonic stem cell
21 chr5:108133400-108141600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
22 chr5:108134600-108139200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
23 chr5:108134600-108146600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
24 chr5:108136400-108139200 Weak transcription Adipose Nuclei Adipose
25 chr5:108136400-108144600 Weak transcription Brain Cingulate Gyrus brain
26 chr5:108136600-108141600 Weak transcription Fetal Stomach stomach
27 chr5:108136800-108139000 Enhancers Hela-S3 cervix
28 chr5:108137600-108138800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
29 chr5:108137600-108141800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
30 chr5:108137600-108146000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
31 chr5:108137600-108153000 Weak transcription Osteobl bone
32 chr5:108137800-108138800 Weak transcription Monocytes-CD14+_RO01746 blood
33 chr5:108137800-108139400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
34 chr5:108137800-108149000 Weak transcription Rectal Smooth Muscle rectum
35 chr5:108138000-108140000 Weak transcription HUVEC blood vessel
36 chr5:108138000-108153200 Weak transcription Muscle Satellite Cultured Cells --
37 chr5:108138200-108138800 ZNF genes & repeats Brain Anterior Caudate brain
38 chr5:108138200-108138800 ZNF genes & repeats NHEK skin
39 chr5:108138200-108139200 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
40 chr5:108138400-108138800 Strong transcription Cortex derived primary cultured neurospheres brain
41 chr5:108138400-108139000 Weak transcription Fetal Intestine Large intestine
42 chr5:108138400-108139200 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
43 chr5:108138600-108138800 ZNF genes & repeats HMEC breast
44 chr5:108138600-108139000 ZNF genes & repeats Breast Myoepithelial Primary Cells Breast
45 chr5:108138600-108139200 ZNF genes & repeats Fetal Kidney kidney
46 chr5:108138600-108140400 ZNF genes & repeats Primary hematopoietic stem cells blood
47 chr5:108138600-108140600 ZNF genes & repeats Fetal Lung lung

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