Variant report

Variant rs13360253
Chromosome Location chr5:108124084-108124085
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:88 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:108090200-108127600 Weak transcription NH-A brain
2 chr5:108096400-108134000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
3 chr5:108098400-108128000 Weak transcription Primary T helper naive cells fromperipheralblood blood
4 chr5:108101600-108127600 Weak transcription Osteobl bone
5 chr5:108105400-108130600 Weak transcription Rectal Smooth Muscle rectum
6 chr5:108105400-108133200 Weak transcription NHDF-Ad bronchial
7 chr5:108112600-108137200 Weak transcription Placenta Amnion Placenta Amnion
8 chr5:108117800-108138200 Weak transcription Liver Liver
9 chr5:108118000-108132800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
10 chr5:108118200-108126600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
11 chr5:108118200-108136800 Weak transcription NHLF lung
12 chr5:108120000-108136800 Weak transcription A549 lung
13 chr5:108120200-108125600 Weak transcription Duodenum Mucosa Duodenum
14 chr5:108120200-108137600 Weak transcription Spleen Spleen
15 chr5:108120200-108142200 Weak transcription Aorta Aorta
16 chr5:108120600-108146400 Weak transcription Rectal Mucosa Donor 31 rectum
17 chr5:108120800-108146400 Weak transcription Rectal Mucosa Donor 29 rectum
18 chr5:108121000-108138600 Weak transcription Fetal Kidney kidney
19 chr5:108121000-108139000 Weak transcription Primary T cells from cord blood blood
20 chr5:108121000-108139200 Weak transcription Sigmoid Colon Sigmoid Colon
21 chr5:108121200-108124400 Weak transcription H1 Cell Line embryonic stem cell
22 chr5:108121200-108125800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
23 chr5:108121200-108126600 Weak transcription iPS-15b Cell Line embryonic stem cell
24 chr5:108121200-108132200 Weak transcription Fetal Lung lung
25 chr5:108121200-108132800 Weak transcription Monocytes-CD14+_RO01746 blood
26 chr5:108121600-108124400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
27 chr5:108121600-108124600 Weak transcription Duodenum Smooth Muscle Duodenum
28 chr5:108121800-108124400 Enhancers Fetal Muscle Leg muscle
29 chr5:108121800-108137200 Weak transcription HSMMtube muscle
30 chr5:108122200-108124200 ZNF genes & repeats ES-UCSF4 Cell Line embryonic stem cell
31 chr5:108122400-108124200 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
32 chr5:108122400-108124200 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
33 chr5:108122600-108124200 ZNF genes & repeats iPS DF 19.11 Cell Line embryonic stem cell
34 chr5:108122600-108124200 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
35 chr5:108122600-108124200 ZNF genes & repeats Foreskin Melanocyte Primary Cells skin01 Skin
36 chr5:108122600-108124200 ZNF genes & repeats Brain Germinal Matrix brain
37 chr5:108122600-108124200 ZNF genes & repeats Fetal Stomach stomach
38 chr5:108122600-108124400 ZNF genes & repeats Ganglion Eminence derived primary cultured neurospheres brain
39 chr5:108122600-108124400 ZNF genes & repeats Fetal Brain Female brain
40 chr5:108122800-108125000 Enhancers Brain Substantia Nigra brain
41 chr5:108123000-108124200 Weak transcription Right Atrium heart
42 chr5:108123000-108138200 Weak transcription Fetal Adrenal Gland Adrenal Gland
43 chr5:108123200-108124200 Strong transcription Fetal Intestine Small intestine
44 chr5:108123200-108124200 Strong transcription Thymus Thymus
45 chr5:108123400-108124200 ZNF genes & repeats H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
46 chr5:108123400-108124200 Strong transcription H1 Derived Mesenchymal Stem Cells ES cell derived
47 chr5:108123400-108124200 Genic enhancers Foreskin Fibroblast Primary Cells skin02 Skin
48 chr5:108123400-108124200 Enhancers Left Ventricle heart
49 chr5:108123400-108124200 Genic enhancers Lung lung
50 chr5:108123400-108124400 Enhancers Colon Smooth Muscle Colon

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