The 2.0 version of rSNPBase

Variant report

Variant rs28765243
Chromosome Location chr5:108126906-108126907
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:69 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:108090200-108127600 Weak transcription NH-A brain
2 chr5:108096400-108134000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
3 chr5:108098400-108128000 Weak transcription Primary T helper naive cells fromperipheralblood blood
4 chr5:108101600-108127600 Weak transcription Osteobl bone
5 chr5:108105400-108130600 Weak transcription Rectal Smooth Muscle rectum
6 chr5:108105400-108133200 Weak transcription NHDF-Ad bronchial
7 chr5:108112600-108137200 Weak transcription Placenta Amnion Placenta Amnion
8 chr5:108117800-108138200 Weak transcription Liver Liver
9 chr5:108118000-108132800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
10 chr5:108118200-108136800 Weak transcription NHLF lung
11 chr5:108120000-108136800 Weak transcription A549 lung
12 chr5:108120200-108137600 Weak transcription Spleen Spleen
13 chr5:108120200-108142200 Weak transcription Aorta Aorta
14 chr5:108120600-108146400 Weak transcription Rectal Mucosa Donor 31 rectum
15 chr5:108120800-108146400 Weak transcription Rectal Mucosa Donor 29 rectum
16 chr5:108121000-108138600 Weak transcription Fetal Kidney kidney
17 chr5:108121000-108139000 Weak transcription Primary T cells from cord blood blood
18 chr5:108121000-108139200 Weak transcription Sigmoid Colon Sigmoid Colon
19 chr5:108121200-108132200 Weak transcription Fetal Lung lung
20 chr5:108121200-108132800 Weak transcription Monocytes-CD14+_RO01746 blood
21 chr5:108121800-108137200 Weak transcription HSMMtube muscle
22 chr5:108123000-108138200 Weak transcription Fetal Adrenal Gland Adrenal Gland
23 chr5:108123400-108138200 Weak transcription Primary B cells from peripheral blood blood
24 chr5:108123400-108139400 Weak transcription Primary T helper cells PMA-I stimulated --
25 chr5:108123800-108131000 Weak transcription Primary hematopoietic stem cells blood
26 chr5:108124000-108132600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
27 chr5:108124000-108133000 Weak transcription HUES6 Cell Line embryonic stem cell
28 chr5:108124000-108136000 Weak transcription Fetal Intestine Large intestine
29 chr5:108124000-108137200 Weak transcription HSMM muscle
30 chr5:108124000-108138800 Weak transcription Fetal Brain Male brain
31 chr5:108124000-108139200 Weak transcription Primary B cells from cord blood blood
32 chr5:108124200-108127400 Weak transcription NHEK skin
33 chr5:108124200-108128000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
34 chr5:108124200-108128200 Weak transcription HMEC breast
35 chr5:108124200-108128800 Weak transcription Cortex derived primary cultured neurospheres brain
36 chr5:108124200-108130400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
37 chr5:108124200-108130600 Weak transcription Brain Germinal Matrix brain
38 chr5:108124200-108130600 Weak transcription Fetal Intestine Small intestine
39 chr5:108124200-108130800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
40 chr5:108124200-108131800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
41 chr5:108124200-108132000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
42 chr5:108124200-108132000 Weak transcription Fetal Stomach stomach
43 chr5:108124200-108132200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
44 chr5:108124200-108132200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
45 chr5:108124200-108132200 Weak transcription Lung lung
46 chr5:108124200-108132800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
47 chr5:108124200-108133000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
48 chr5:108124200-108133000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
49 chr5:108124200-108135600 Weak transcription Adipose Nuclei Adipose
50 chr5:108124200-108136000 Weak transcription Right Ventricle heart

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Last update: Aug 31, 2015