The 2.0 version of rSNPBase

Variant report

Variant rs10477935
Chromosome Location chr5:108126076-108126077
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:70 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:108090200-108127600 Weak transcription NH-A brain
2 chr5:108096400-108134000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
3 chr5:108098400-108128000 Weak transcription Primary T helper naive cells fromperipheralblood blood
4 chr5:108101600-108127600 Weak transcription Osteobl bone
5 chr5:108105400-108130600 Weak transcription Rectal Smooth Muscle rectum
6 chr5:108105400-108133200 Weak transcription NHDF-Ad bronchial
7 chr5:108112600-108137200 Weak transcription Placenta Amnion Placenta Amnion
8 chr5:108117800-108138200 Weak transcription Liver Liver
9 chr5:108118000-108132800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
10 chr5:108118200-108126600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
11 chr5:108118200-108136800 Weak transcription NHLF lung
12 chr5:108120000-108136800 Weak transcription A549 lung
13 chr5:108120200-108137600 Weak transcription Spleen Spleen
14 chr5:108120200-108142200 Weak transcription Aorta Aorta
15 chr5:108120600-108146400 Weak transcription Rectal Mucosa Donor 31 rectum
16 chr5:108120800-108146400 Weak transcription Rectal Mucosa Donor 29 rectum
17 chr5:108121000-108138600 Weak transcription Fetal Kidney kidney
18 chr5:108121000-108139000 Weak transcription Primary T cells from cord blood blood
19 chr5:108121000-108139200 Weak transcription Sigmoid Colon Sigmoid Colon
20 chr5:108121200-108126600 Weak transcription iPS-15b Cell Line embryonic stem cell
21 chr5:108121200-108132200 Weak transcription Fetal Lung lung
22 chr5:108121200-108132800 Weak transcription Monocytes-CD14+_RO01746 blood
23 chr5:108121800-108137200 Weak transcription HSMMtube muscle
24 chr5:108123000-108138200 Weak transcription Fetal Adrenal Gland Adrenal Gland
25 chr5:108123400-108138200 Weak transcription Primary B cells from peripheral blood blood
26 chr5:108123400-108139400 Weak transcription Primary T helper cells PMA-I stimulated --
27 chr5:108123800-108131000 Weak transcription Primary hematopoietic stem cells blood
28 chr5:108124000-108132600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
29 chr5:108124000-108133000 Weak transcription HUES6 Cell Line embryonic stem cell
30 chr5:108124000-108136000 Weak transcription Fetal Intestine Large intestine
31 chr5:108124000-108137200 Weak transcription HSMM muscle
32 chr5:108124000-108138800 Weak transcription Fetal Brain Male brain
33 chr5:108124000-108139200 Weak transcription Primary B cells from cord blood blood
34 chr5:108124200-108127400 Weak transcription NHEK skin
35 chr5:108124200-108128000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
36 chr5:108124200-108128200 Weak transcription HMEC breast
37 chr5:108124200-108128800 Weak transcription Cortex derived primary cultured neurospheres brain
38 chr5:108124200-108130400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
39 chr5:108124200-108130600 Weak transcription Brain Germinal Matrix brain
40 chr5:108124200-108130600 Weak transcription Fetal Intestine Small intestine
41 chr5:108124200-108130800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
42 chr5:108124200-108131800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
43 chr5:108124200-108132000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
44 chr5:108124200-108132000 Weak transcription Fetal Stomach stomach
45 chr5:108124200-108132200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
46 chr5:108124200-108132200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
47 chr5:108124200-108132200 Weak transcription Lung lung
48 chr5:108124200-108132800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
49 chr5:108124200-108133000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
50 chr5:108124200-108133000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived

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Last update: Aug 31, 2015