Variant report

Variant rs2009646
Chromosome Location chr5:108120958-108120959
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:97 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:108090200-108127600 Weak transcription NH-A brain
2 chr5:108095000-108122600 Weak transcription Right Ventricle heart
3 chr5:108096400-108134000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
4 chr5:108098400-108128000 Weak transcription Primary T helper naive cells fromperipheralblood blood
5 chr5:108099400-108122400 Weak transcription Brain Cingulate Gyrus brain
6 chr5:108101600-108127600 Weak transcription Osteobl bone
7 chr5:108105400-108123400 Weak transcription Brain Anterior Caudate brain
8 chr5:108105400-108130600 Weak transcription Rectal Smooth Muscle rectum
9 chr5:108105400-108133200 Weak transcription NHDF-Ad bronchial
10 chr5:108112600-108137200 Weak transcription Placenta Amnion Placenta Amnion
11 chr5:108117600-108123600 Weak transcription Brain Angular Gyrus brain
12 chr5:108117800-108122800 Weak transcription Skeletal Muscle Female skeletal muscle
13 chr5:108117800-108138200 Weak transcription Liver Liver
14 chr5:108118000-108122200 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
15 chr5:108118000-108122800 Weak transcription Brain Substantia Nigra brain
16 chr5:108118000-108132800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
17 chr5:108118200-108126600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
18 chr5:108118200-108136800 Weak transcription NHLF lung
19 chr5:108119200-108121000 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
20 chr5:108119200-108121000 ZNF genes & repeats Fetal Kidney kidney
21 chr5:108119200-108121200 ZNF genes & repeats HUES64 Cell Line embryonic stem cell
22 chr5:108119200-108121200 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
23 chr5:108119200-108121200 ZNF genes & repeats Monocytes-CD14+_RO01746 blood
24 chr5:108119200-108123800 ZNF genes & repeats Cortex derived primary cultured neurospheres brain
25 chr5:108119400-108121000 ZNF genes & repeats H9 Cell Line embryonic stem cell
26 chr5:108119400-108121000 ZNF genes & repeats IMR90 fetal lung fibroblasts Cell Line lung
27 chr5:108119400-108121000 ZNF genes & repeats Primary T cells from cord blood blood
28 chr5:108119400-108121200 ZNF genes & repeats ES-I3 Cell Line embryonic stem cell
29 chr5:108119400-108121200 ZNF genes & repeats H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
30 chr5:108119400-108121200 ZNF genes & repeats HUES6 Cell Line embryonic stem cell
31 chr5:108119400-108121200 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
32 chr5:108119400-108121200 ZNF genes & repeats Brain Germinal Matrix brain
33 chr5:108119400-108121200 ZNF genes & repeats Fetal Brain Female brain
34 chr5:108119400-108121200 ZNF genes & repeats Lung lung
35 chr5:108119400-108121200 ZNF genes & repeats Dnd41 blood
36 chr5:108119400-108121400 ZNF genes & repeats hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
37 chr5:108119400-108121400 ZNF genes & repeats ES-UCSF4 Cell Line embryonic stem cell
38 chr5:108119400-108121400 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
39 chr5:108119400-108121400 ZNF genes & repeats Ganglion Eminence derived primary cultured neurospheres brain
40 chr5:108119400-108121400 ZNF genes & repeats Esophagus oesophagus
41 chr5:108119400-108121400 Strong transcription Fetal Adrenal Gland Adrenal Gland
42 chr5:108119400-108121400 ZNF genes & repeats Fetal Stomach stomach
43 chr5:108119400-108121400 Strong transcription Hela-S3 cervix
44 chr5:108119400-108121600 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
45 chr5:108119400-108123200 ZNF genes & repeats Fetal Intestine Small intestine
46 chr5:108119400-108124000 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
47 chr5:108119600-108121000 ZNF genes & repeats H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
48 chr5:108119600-108121000 ZNF genes & repeats H9 Derived Neuron Cultured Cells ES cell derived
49 chr5:108119600-108121000 ZNF genes & repeats Placenta Placenta
50 chr5:108119600-108121000 Strong transcription Ovary ovary

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