Variant report

Variant	rs10094336
Chromosome Location	chr8:129887096-129887097
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:129880648..129882498-chr8:129885129..129887830,2	K562	blood:

Extended variants
information (count: 33 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:33)

rs_ID	r²[population]
rs10098392	0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs10100830	0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs10956452	0.84[ASN][1000 genomes]
rs1155582	0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11989639	0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1372451	0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1519849	0.98[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1519850	1.00[ASN][1000 genomes]
rs1519851	0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1519852	0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1850889	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1914998	0.84[AFR][1000 genomes];0.89[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs2056314	0.90[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2119756	0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2395855	0.80[AFR][1000 genomes];0.89[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs2395864	0.96[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs2395865	0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4568584	0.89[ASN][1000 genomes]
rs4628229	1.00[ASN][1000 genomes]
rs4733532	0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4733659	0.96[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6470666	0.90[AFR][1000 genomes];0.92[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs6470669	0.93[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs6470670	1.00[ASN][1000 genomes]
rs66941142	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6994811	0.88[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs7010446	0.97[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7018093	0.95[AFR][1000 genomes];0.99[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs756122	0.97[AFR][1000 genomes];0.99[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7815713	0.92[ASN][1000 genomes]
rs7841974	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9283956	0.84[EUR][1000 genomes]
rs9297778	0.88[EUR][1000 genomes]

No data

Chromatin state (count:32 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:129881600-129894200	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
2	chr8:129882800-129888600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr8:129885000-129887400	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
4	chr8:129885600-129887400	Enhancers	HUES64 Cell Line	embryonic stem cell
5	chr8:129885800-129887400	Enhancers	NHDF-Ad	bronchial
6	chr8:129886000-129887400	Enhancers	H1 Cell Line	embryonic stem cell
7	chr8:129886000-129887400	Enhancers	Cortex derived primary cultured neurospheres	brain
8	chr8:129886200-129887200	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
9	chr8:129886200-129887400	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
10	chr8:129886200-129887400	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
11	chr8:129886200-129891400	Enhancers	Dnd41	blood
12	chr8:129886400-129887200	Enhancers	iPS-15b Cell Line	embryonic stem cell
13	chr8:129886400-129887200	Enhancers	Muscle Satellite Cultured Cells	--
14	chr8:129886400-129887200	Enhancers	Fetal Stomach	stomach
15	chr8:129886400-129887200	Enhancers	Osteobl	bone
16	chr8:129886400-129887400	Enhancers	HUES48 Cell Line	embryonic stem cell
17	chr8:129886400-129887400	Enhancers	HUES6 Cell Line	embryonic stem cell
18	chr8:129886400-129887400	Enhancers	iPS-18 Cell Line	embryonic stem cell
19	chr8:129886400-129887400	Enhancers	iPS-20b Cell Line	embryonic stem cell
20	chr8:129886400-129887400	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
21	chr8:129886400-129887400	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
22	chr8:129886600-129887200	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
23	chr8:129886600-129887200	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
24	chr8:129886600-129887200	Enhancers	Fetal Brain Female	brain
25	chr8:129886600-129887200	Enhancers	NHEK	skin
26	chr8:129886600-129887400	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
27	chr8:129886600-129887400	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
28	chr8:129886600-129887400	Enhancers	Fetal Thymus	thymus
29	chr8:129887000-129887400	Enhancers	ES-I3 Cell Line	embryonic stem cell
30	chr8:129887000-129887400	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
31	chr8:129887000-129888800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
32	chr8:129887000-129889400	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell

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