Variant report

Variant	rs7018093
Chromosome Location	chr8:129891232-129891233
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:129890413..129893226-chr8:129893231..129894881,2	MCF-7	breast:

Extended variants
information (count: 32 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:32)

rs_ID	r²[population]
rs10094336	0.95[AFR][1000 genomes];0.99[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10098392	0.91[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs10100830	0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs10956452	0.84[ASN][1000 genomes]
rs1155582	0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11989639	0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1372451	0.91[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1519849	0.92[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1519850	1.00[ASN][1000 genomes]
rs1519851	0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1519852	0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1850889	0.95[AFR][1000 genomes];0.99[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1914998	0.80[AFR][1000 genomes];0.88[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs2056314	0.89[AMR][1000 genomes];0.93[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2119756	0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2395855	0.88[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs2395864	0.90[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs2395865	0.90[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4568584	0.89[ASN][1000 genomes]
rs4628229	1.00[ASN][1000 genomes]
rs4733532	0.89[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4733659	0.90[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6470666	0.85[AFR][1000 genomes];0.91[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs6470669	0.95[AFR][1000 genomes];0.93[AMR][1000 genomes];0.91[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs6470670	1.00[ASN][1000 genomes]
rs66941142	0.95[AFR][1000 genomes];0.99[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6994811	0.86[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs7010446	0.98[AFR][1000 genomes];0.96[AMR][1000 genomes];0.92[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs756122	0.92[AFR][1000 genomes];0.97[AMR][1000 genomes];0.90[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7815713	0.92[ASN][1000 genomes]
rs7841974	0.95[AFR][1000 genomes];0.99[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9297778	0.82[EUR][1000 genomes]

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:129881600-129894200	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
2	chr8:129886200-129891400	Enhancers	Dnd41	blood
3	chr8:129887200-129894000	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
4	chr8:129887400-129894800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
5	chr8:129887400-129896000	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
6	chr8:129890200-129893800	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
7	chr8:129890400-129895800	Weak transcription	NHLF	lung
8	chr8:129890600-129893000	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
9	chr8:129890600-129894200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
10	chr8:129890800-129893000	Weak transcription	NHDF-Ad	bronchial
11	chr8:129890800-129894200	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
12	chr8:129891200-129891600	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin

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