Variant report

Variant	rs9297778
Chromosome Location	chr8:129909521-129909522
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 26 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:26)

rs_ID	r²[population]
rs10094336	0.88[EUR][1000 genomes]
rs10098392	0.87[AFR][1000 genomes];0.86[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs10100830	0.87[AFR][1000 genomes];0.85[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs1155582	0.87[AFR][1000 genomes];0.85[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs11989639	0.87[AFR][1000 genomes];0.86[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs1372451	0.84[AFR][1000 genomes];0.86[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs1519849	0.92[AFR][1000 genomes];0.85[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs1519851	0.92[AFR][1000 genomes];0.85[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs1519852	0.93[AFR][1000 genomes];0.85[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs1850889	0.88[EUR][1000 genomes]
rs1914998	0.82[EUR][1000 genomes]
rs2056314	0.88[EUR][1000 genomes]
rs2119756	0.94[AFR][1000 genomes];0.85[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs2395855	0.84[EUR][1000 genomes]
rs2395864	0.97[AFR][1000 genomes];0.88[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs2395865	0.95[AFR][1000 genomes];0.88[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs4733532	0.88[AFR][1000 genomes];0.85[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs4733659	0.97[AFR][1000 genomes];0.88[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs6470666	0.86[EUR][1000 genomes]
rs6470669	0.87[EUR][1000 genomes]
rs66941142	0.88[EUR][1000 genomes]
rs7010446	0.87[EUR][1000 genomes]
rs7018093	0.82[EUR][1000 genomes]
rs756122	0.89[EUR][1000 genomes]
rs7841974	0.88[EUR][1000 genomes]
rs9283956	0.85[AMR][1000 genomes];0.85[EUR][1000 genomes];0.81[ASN][1000 genomes]

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:129899600-129909800	Weak transcription	Dnd41	blood
2	chr8:129903400-129911800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
3	chr8:129903800-129911600	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
4	chr8:129908200-129910600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
5	chr8:129909200-129909600	Active TSS	H9 Cell Line	embryonic stem cell
6	chr8:129909200-129909600	Active TSS	HUES64 Cell Line	embryonic stem cell
7	chr8:129909200-129909800	Active TSS	HUES6 Cell Line	embryonic stem cell

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