Variant report

rSNPs within LD-proxies of this variant (count:29)

rs_ID	r²[population]
rs10094336	0.80[AFR][1000 genomes];0.89[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs10098392	0.91[EUR][1000 genomes]
rs10100830	0.92[EUR][1000 genomes]
rs1155582	0.92[EUR][1000 genomes]
rs11989639	0.93[EUR][1000 genomes]
rs1372451	0.92[EUR][1000 genomes]
rs1519849	0.92[EUR][1000 genomes]
rs1519851	0.92[EUR][1000 genomes]
rs1519852	0.92[EUR][1000 genomes]
rs1850889	0.80[AFR][1000 genomes];0.89[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs1914998	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2056314	0.80[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs2119756	0.93[EUR][1000 genomes]
rs2395864	0.91[EUR][1000 genomes]
rs2395865	0.91[EUR][1000 genomes]
rs4733531	1.00[ASN][1000 genomes]
rs4733532	0.90[EUR][1000 genomes]
rs4733659	0.91[EUR][1000 genomes]
rs6470666	0.83[AFR][1000 genomes];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6470669	0.80[AFR][1000 genomes];0.92[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs66941142	0.80[AFR][1000 genomes];0.89[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs6994811	0.82[EUR][1000 genomes]
rs7010446	0.92[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs7018093	0.88[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs756122	0.88[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs7841974	0.80[AFR][1000 genomes];0.89[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs873761	0.90[ASN][1000 genomes]
rs873762	0.90[ASN][1000 genomes]
rs9297778	0.84[EUR][1000 genomes]

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs2395855	HHLA1	cis	parietal	SCAN

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:129839400-129841000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
2	chr8:129839400-129843800	Enhancers	Dnd41	blood
3	chr8:129839600-129841000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
4	chr8:129839800-129840800	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
5	chr8:129839800-129841200	Enhancers	Primary hematopoietic stem cells	blood
6	chr8:129840200-129841000	Enhancers	Stomach Mucosa	stomach
7	chr8:129840400-129841000	Enhancers	Primary hematopoietic stem cells short term culture	blood
8	chr8:129840400-129841000	Enhancers	Fetal Thymus	thymus
9	chr8:129840600-129840800	Enhancers	Small Intestine	intestine
10	chr8:129840600-129841000	Enhancers	Thymus	Thymus

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