Variant report

No.	Distal block	Cell Line	Cell type
1	chr13:98072792..98075244-chr13:98079241..98080858,2	K562	blood:
2	chr13:98072727..98076727-chr13:98084018..98087708,5	MCF-7	breast:
3	chr13:98071956..98074377-chr13:98092594..98095295,2	K562	blood:

Variant related genes	Relation type
ENSG00000125249	Chromatin interaction

rSNPs within LD-proxies of this variant (count:28)

rs_ID	r²[population]
rs10161600	1.00[EUR][1000 genomes]
rs12100323	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs12100327	0.87[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs13378123	0.92[EUR][1000 genomes]
rs13378459	1.00[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs13378500	0.92[EUR][1000 genomes]
rs13378554	0.92[EUR][1000 genomes]
rs13378832	0.92[EUR][1000 genomes]
rs13378938	0.92[EUR][1000 genomes]
rs55935003	0.92[EUR][1000 genomes]
rs74105181	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs9300412	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs9300413	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs9300414	0.81[AFR][1000 genomes];0.82[EUR][1000 genomes]
rs9582131	1.00[EUR][1000 genomes]
rs9582135	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs9582137	0.87[AMR][1000 genomes]
rs9584567	1.00[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs9584570	0.87[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs9584572	0.92[EUR][1000 genomes]
rs9584573	0.92[EUR][1000 genomes]
rs9584574	1.00[EUR][1000 genomes]
rs9584575	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9584576	1.00[EUR][1000 genomes]
rs9584577	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs9584578	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs9584580	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs9584581	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832694	chr13:97930561-98137882	ZNF genes & repeats Weak transcription Strong transcription Enhancers Flanking Active TSS Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:98065200-98074800	Weak transcription	NHDF-Ad	bronchial

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