The 2.0 version of rSNPBase

Variant report

Variant rs10197528
Chromosome Location chr2:72368687-72368688
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:41 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:72359400-72370000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
2 chr2:72360400-72370400 Weak transcription Aorta Aorta
3 chr2:72362600-72370000 Bivalent Enhancer Fetal Muscle Trunk muscle
4 chr2:72364000-72368800 Bivalent Enhancer Fetal Adrenal Gland Adrenal Gland
5 chr2:72364600-72370000 Enhancers Skeletal Muscle Female skeletal muscle
6 chr2:72364800-72368800 Enhancers Spleen Spleen
7 chr2:72365000-72369600 Weak transcription Brain Hippocampus Middle brain
8 chr2:72365000-72370000 Weak transcription Esophagus oesophagus
9 chr2:72365400-72369800 Weak transcription Brain Inferior Temporal Lobe brain
10 chr2:72365800-72370000 Weak transcription Lung lung
11 chr2:72365800-72370000 Weak transcription Ovary ovary
12 chr2:72366000-72370200 Weak transcription Pancreas Pancrea
13 chr2:72366200-72369400 Enhancers Adipose Nuclei Adipose
14 chr2:72366200-72369400 Weak transcription Rectal Mucosa Donor 31 rectum
15 chr2:72366200-72369800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
16 chr2:72366200-72370000 Weak transcription Liver Liver
17 chr2:72366200-72370000 Weak transcription Brain Substantia Nigra brain
18 chr2:72366400-72369400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
19 chr2:72366400-72370000 Weak transcription Left Ventricle heart
20 chr2:72366400-72370000 Weak transcription Right Atrium heart
21 chr2:72366400-72370000 Weak transcription NHDF-Ad bronchial
22 chr2:72366400-72370400 Weak transcription Psoas Muscle Psoas
23 chr2:72366600-72369800 Weak transcription Colonic Mucosa Colon
24 chr2:72366800-72369600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
25 chr2:72366800-72370000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
26 chr2:72366800-72370000 Weak transcription Gastric stomach
27 chr2:72366800-72370000 Weak transcription Right Ventricle heart
28 chr2:72367000-72369800 Weak transcription Duodenum Mucosa Duodenum
29 chr2:72367200-72368800 Weak transcription Hela-S3 cervix
30 chr2:72367200-72369400 Weak transcription Fetal Heart heart
31 chr2:72367400-72369600 Weak transcription A549 lung
32 chr2:72368200-72370000 Bivalent Enhancer iPS DF 19.11 Cell Line embryonic stem cell
33 chr2:72368200-72370000 Bivalent Enhancer Fetal Stomach stomach
34 chr2:72368400-72369200 Weak transcription Fetal Thymus thymus
35 chr2:72368400-72369600 Weak transcription Skeletal Muscle Male skeletal muscle
36 chr2:72368600-72368800 Bivalent Enhancer iPS DF 6.9 Cell Line embryonic stem cell
37 chr2:72368600-72368800 Bivalent Enhancer Foreskin Melanocyte Primary Cells skin03 Skin
38 chr2:72368600-72368800 Bivalent Enhancer Fetal Brain Female brain
39 chr2:72368600-72369600 Enhancers Placenta Amnion Placenta Amnion
40 chr2:72368600-72369800 Bivalent Enhancer Fetal Muscle Leg muscle
41 chr2:72368600-72370000 Bivalent Enhancer ES-UCSF4 Cell Line embryonic stem cell

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Last update: Aug 31, 2015