The 2.0 version of rSNPBase

Variant report

Variant rs72908317
Chromosome Location chr2:72366166-72366167
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:52 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:72359400-72370000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
2 chr2:72360400-72370400 Weak transcription Aorta Aorta
3 chr2:72362600-72370000 Bivalent Enhancer Fetal Muscle Trunk muscle
4 chr2:72363000-72366200 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
5 chr2:72363000-72366800 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
6 chr2:72363200-72366200 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
7 chr2:72363200-72366600 Enhancers ES-UCSF4 Cell Line embryonic stem cell
8 chr2:72363400-72368600 Genic enhancers Placenta Amnion Placenta Amnion
9 chr2:72363600-72366200 Enhancers Brain Substantia Nigra brain
10 chr2:72363800-72366200 Bivalent Enhancer Fetal Stomach stomach
11 chr2:72363800-72366400 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
12 chr2:72363800-72366800 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
13 chr2:72364000-72368800 Bivalent Enhancer Fetal Adrenal Gland Adrenal Gland
14 chr2:72364200-72367200 Enhancers Fetal Heart heart
15 chr2:72364400-72366400 Enhancers NHDF-Ad bronchial
16 chr2:72364400-72367400 Enhancers Fetal Thymus thymus
17 chr2:72364600-72366200 Enhancers Rectal Mucosa Donor 31 rectum
18 chr2:72364600-72366400 Enhancers Psoas Muscle Psoas
19 chr2:72364600-72366400 Enhancers Right Atrium heart
20 chr2:72364600-72366600 Bivalent Enhancer Foreskin Melanocyte Primary Cells skin01 Skin
21 chr2:72364600-72366600 Enhancers Colonic Mucosa Colon
22 chr2:72364600-72366800 Enhancers Fetal Intestine Small intestine
23 chr2:72364600-72366800 Enhancers Right Ventricle heart
24 chr2:72364600-72366800 Bivalent Enhancer Stomach Mucosa stomach
25 chr2:72364600-72367000 Enhancers Fetal Intestine Large intestine
26 chr2:72364600-72370000 Enhancers Skeletal Muscle Female skeletal muscle
27 chr2:72364800-72366400 Enhancers Left Ventricle heart
28 chr2:72364800-72366600 Enhancers Rectal Mucosa Donor 29 rectum
29 chr2:72364800-72366800 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
30 chr2:72364800-72367400 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
31 chr2:72364800-72368800 Enhancers Spleen Spleen
32 chr2:72365000-72367200 Enhancers HSMMtube muscle
33 chr2:72365000-72367400 Enhancers HSMM muscle
34 chr2:72365000-72369600 Weak transcription Brain Hippocampus Middle brain
35 chr2:72365000-72370000 Weak transcription Esophagus oesophagus
36 chr2:72365200-72366200 Enhancers Liver Liver
37 chr2:72365200-72366800 Enhancers Gastric stomach
38 chr2:72365400-72366200 Flanking Active TSS Adipose Nuclei Adipose
39 chr2:72365400-72368400 Enhancers Skeletal Muscle Male skeletal muscle
40 chr2:72365400-72369800 Weak transcription Brain Inferior Temporal Lobe brain
41 chr2:72365600-72366200 Bivalent Enhancer ES-I3 Cell Line embryonic stem cell
42 chr2:72365600-72366600 Bivalent Enhancer iPS DF 19.11 Cell Line embryonic stem cell
43 chr2:72365800-72367000 Enhancers Duodenum Mucosa Duodenum
44 chr2:72365800-72367400 Bivalent Enhancer Fetal Muscle Leg muscle
45 chr2:72365800-72370000 Weak transcription Lung lung
46 chr2:72365800-72370000 Weak transcription Ovary ovary
47 chr2:72366000-72366200 Bivalent Enhancer HUES6 Cell Line embryonic stem cell
48 chr2:72366000-72366200 Enhancers Placenta Placenta
49 chr2:72366000-72367000 Bivalent Enhancer HepG2 liver
50 chr2:72366000-72367200 Enhancers Hela-S3 cervix

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Last update: Aug 31, 2015