The 2.0 version of rSNPBase

Variant report

Variant rs17007939
Chromosome Location chr2:72432925-72432926
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:51 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:72426800-72437600 Weak transcription NH-A brain
2 chr2:72429000-72433200 Enhancers Breast Myoepithelial Primary Cells Breast
3 chr2:72429200-72433600 Enhancers Fetal Intestine Large intestine
4 chr2:72429400-72433000 Enhancers Fetal Lung lung
5 chr2:72429800-72433200 Enhancers Right Ventricle heart
6 chr2:72430000-72433200 Enhancers Ovary ovary
7 chr2:72430200-72433400 Enhancers Brain Substantia Nigra brain
8 chr2:72430400-72433200 Enhancers Colon Smooth Muscle Colon
9 chr2:72430400-72433600 Enhancers Fetal Stomach stomach
10 chr2:72430600-72433400 Enhancers Brain Anterior Caudate brain
11 chr2:72430800-72433000 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
12 chr2:72430800-72433000 Enhancers Pancreas Pancrea
13 chr2:72430800-72433200 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
14 chr2:72430800-72433200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
15 chr2:72430800-72433200 Enhancers Brain Dorsolateral Prefrontal Cortex brain
16 chr2:72430800-72433200 Enhancers Fetal Adrenal Gland Adrenal Gland
17 chr2:72430800-72433200 Enhancers Fetal Kidney kidney
18 chr2:72430800-72433200 Enhancers Fetal Muscle Leg muscle
19 chr2:72430800-72433200 Enhancers Right Atrium heart
20 chr2:72430800-72433200 Enhancers Stomach Mucosa stomach
21 chr2:72430800-72433400 Enhancers Fetal Intestine Small intestine
22 chr2:72430800-72433600 Enhancers Duodenum Mucosa Duodenum
23 chr2:72430800-72433600 Enhancers Small Intestine intestine
24 chr2:72431000-72433000 Enhancers Skeletal Muscle Male skeletal muscle
25 chr2:72431000-72433200 Enhancers Duodenum Smooth Muscle Duodenum
26 chr2:72431000-72433200 Enhancers Left Ventricle heart
27 chr2:72431000-72433600 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
28 chr2:72431200-72433200 Enhancers Adipose Nuclei Adipose
29 chr2:72431200-72433200 Enhancers Brain Angular Gyrus brain
30 chr2:72431200-72433400 Enhancers Fetal Heart heart
31 chr2:72431200-72433400 Enhancers Sigmoid Colon Sigmoid Colon
32 chr2:72431400-72433200 Enhancers Brain Cingulate Gyrus brain
33 chr2:72431400-72433200 Enhancers Brain Inferior Temporal Lobe brain
34 chr2:72431400-72433200 Enhancers Lung lung
35 chr2:72431400-72433800 Enhancers Brain Hippocampus Middle brain
36 chr2:72432200-72433200 Enhancers Cortex derived primary cultured neurospheres brain
37 chr2:72432200-72433200 Enhancers A549 lung
38 chr2:72432200-72433800 Enhancers Rectal Mucosa Donor 31 rectum
39 chr2:72432400-72433000 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
40 chr2:72432600-72433000 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
41 chr2:72432600-72433000 Enhancers Fetal Muscle Trunk muscle
42 chr2:72432600-72433000 Enhancers Placenta Placenta
43 chr2:72432800-72433000 Flanking Active TSS HepG2 liver
44 chr2:72432800-72437600 Weak transcription Colonic Mucosa Colon
45 chr2:72432800-72437600 Weak transcription Esophagus oesophagus
46 chr2:72432800-72437600 Weak transcription Gastric stomach
47 chr2:72432800-72437800 Weak transcription Osteobl bone
48 chr2:72432800-72438400 Weak transcription Rectal Mucosa Donor 29 rectum
49 chr2:72432800-72438400 Weak transcription NHDF-Ad bronchial
50 chr2:72432800-72441600 Weak transcription Muscle Satellite Cultured Cells --

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Last update: Aug 31, 2015