The 2.0 version of rSNPBase

Variant report

Variant rs72908315
Chromosome Location chr2:72365567-72365568
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:56 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:72359400-72370000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
2 chr2:72360400-72370400 Weak transcription Aorta Aorta
3 chr2:72362600-72370000 Bivalent Enhancer Fetal Muscle Trunk muscle
4 chr2:72363000-72365800 Enhancers Fetal Muscle Leg muscle
5 chr2:72363000-72366200 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
6 chr2:72363000-72366800 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
7 chr2:72363200-72366200 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr2:72363200-72366600 Enhancers ES-UCSF4 Cell Line embryonic stem cell
9 chr2:72363400-72368600 Genic enhancers Placenta Amnion Placenta Amnion
10 chr2:72363600-72366200 Enhancers Brain Substantia Nigra brain
11 chr2:72363800-72366200 Bivalent Enhancer Fetal Stomach stomach
12 chr2:72363800-72366400 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
13 chr2:72363800-72366800 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
14 chr2:72364000-72368800 Bivalent Enhancer Fetal Adrenal Gland Adrenal Gland
15 chr2:72364200-72365800 Bivalent Enhancer Foreskin Fibroblast Primary Cells skin02 Skin
16 chr2:72364200-72367200 Enhancers Fetal Heart heart
17 chr2:72364400-72366400 Enhancers NHDF-Ad bronchial
18 chr2:72364400-72367400 Enhancers Fetal Thymus thymus
19 chr2:72364600-72365800 Enhancers Placenta Placenta
20 chr2:72364600-72366000 Flanking Bivalent TSS/Enh HepG2 liver
21 chr2:72364600-72366200 Enhancers Rectal Mucosa Donor 31 rectum
22 chr2:72364600-72366400 Enhancers Psoas Muscle Psoas
23 chr2:72364600-72366400 Enhancers Right Atrium heart
24 chr2:72364600-72366600 Bivalent Enhancer Foreskin Melanocyte Primary Cells skin01 Skin
25 chr2:72364600-72366600 Enhancers Colonic Mucosa Colon
26 chr2:72364600-72366800 Enhancers Fetal Intestine Small intestine
27 chr2:72364600-72366800 Enhancers Right Ventricle heart
28 chr2:72364600-72366800 Bivalent Enhancer Stomach Mucosa stomach
29 chr2:72364600-72367000 Enhancers Fetal Intestine Large intestine
30 chr2:72364600-72370000 Enhancers Skeletal Muscle Female skeletal muscle
31 chr2:72364800-72365600 Enhancers H1 Cell Line embryonic stem cell
32 chr2:72364800-72365800 Enhancers ES-WA7 Cell Line embryonic stem cell
33 chr2:72364800-72365800 Flanking Active TSS Duodenum Mucosa Duodenum
34 chr2:72364800-72365800 Enhancers Lung lung
35 chr2:72364800-72366000 Enhancers Pancreas Pancrea
36 chr2:72364800-72366000 Enhancers Sigmoid Colon Sigmoid Colon
37 chr2:72364800-72366000 Flanking Active TSS Hela-S3 cervix
38 chr2:72364800-72366400 Enhancers Left Ventricle heart
39 chr2:72364800-72366600 Enhancers Rectal Mucosa Donor 29 rectum
40 chr2:72364800-72366800 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
41 chr2:72364800-72367400 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
42 chr2:72364800-72368800 Enhancers Spleen Spleen
43 chr2:72365000-72365600 Genic enhancers iPS DF 19.11 Cell Line embryonic stem cell
44 chr2:72365000-72365800 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
45 chr2:72365000-72366000 Flanking Active TSS A549 lung
46 chr2:72365000-72367200 Enhancers HSMMtube muscle
47 chr2:72365000-72367400 Enhancers HSMM muscle
48 chr2:72365000-72369600 Weak transcription Brain Hippocampus Middle brain
49 chr2:72365000-72370000 Weak transcription Esophagus oesophagus
50 chr2:72365200-72365800 Enhancers Ovary ovary

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Last update: Aug 31, 2015