Variant report
Variant | rs13411648 |
---|---|
Chromosome Location | chr2:72352766-72352767 |
allele | G/T |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
No data |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs10173152 | 1.00[ASN][1000 genomes] |
rs10193621 | 1.00[ASN][1000 genomes] |
rs10197528 | 1.00[ASN][1000 genomes] |
rs10203221 | 1.00[ASN][1000 genomes] |
rs10207869 | 1.00[ASN][1000 genomes] |
rs1079144 | 1.00[CEU][hapmap];1.00[ASN][1000 genomes] |
rs11680197 | 1.00[ASN][1000 genomes] |
rs11682749 | 1.00[ASN][1000 genomes] |
rs11684981 | 1.00[ASN][1000 genomes] |
rs11685903 | 1.00[ASN][1000 genomes] |
rs11884225 | 1.00[ASN][1000 genomes] |
rs11884869 | 1.00[ASN][1000 genomes] |
rs11890482 | 1.00[ASN][1000 genomes] |
rs11891573 | 1.00[ASN][1000 genomes] |
rs11894521 | 1.00[ASN][1000 genomes] |
rs11899270 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes] |
rs11899672 | 1.00[ASN][1000 genomes] |
rs11902051 | 1.00[ASN][1000 genomes] |
rs11903453 | 1.00[ASN][1000 genomes] |
rs11903908 | 1.00[ASN][1000 genomes] |
rs11903912 | 1.00[ASN][1000 genomes] |
rs1387 | 1.00[ASN][1000 genomes] |
rs1517179 | 1.00[ASN][1000 genomes] |
rs17007922 | 1.00[ASN][1000 genomes] |
rs17007926 | 1.00[ASN][1000 genomes] |
rs17007939 | 1.00[ASN][1000 genomes] |
rs17007984 | 1.00[ASN][1000 genomes] |
rs17008057 | 1.00[ASN][1000 genomes] |
rs17008082 | 1.00[ASN][1000 genomes] |
rs28503372 | 1.00[ASN][1000 genomes] |
rs34172703 | 1.00[ASN][1000 genomes] |
rs35064163 | 1.00[ASN][1000 genomes] |
rs55700162 | 1.00[ASN][1000 genomes] |
rs55714718 | 1.00[ASN][1000 genomes] |
rs55939880 | 1.00[ASN][1000 genomes] |
rs56173504 | 1.00[ASN][1000 genomes] |
rs56178437 | 1.00[ASN][1000 genomes] |
rs56184446 | 1.00[ASN][1000 genomes] |
rs56718524 | 1.00[ASN][1000 genomes] |
rs57730885 | 1.00[ASN][1000 genomes] |
rs58035683 | 1.00[ASN][1000 genomes] |
rs58582296 | 1.00[ASN][1000 genomes] |
rs60806585 | 1.00[ASN][1000 genomes] |
rs60872571 | 1.00[ASN][1000 genomes] |
rs60977474 | 1.00[ASN][1000 genomes] |
rs61037557 | 1.00[ASN][1000 genomes] |
rs61448485 | 1.00[ASN][1000 genomes] |
rs6546751 | 1.00[ASN][1000 genomes] |
rs6546754 | 1.00[ASN][1000 genomes] |
rs6546761 | 1.00[ASN][1000 genomes] |
rs6546763 | 1.00[ASN][1000 genomes] |
rs66539158 | 1.00[ASN][1000 genomes] |
rs66560019 | 1.00[ASN][1000 genomes] |
rs66888584 | 1.00[ASN][1000 genomes] |
rs66920016 | 1.00[ASN][1000 genomes] |
rs6709233 | 1.00[ASN][1000 genomes] |
rs6709493 | 1.00[ASN][1000 genomes] |
rs6711442 | 1.00[ASN][1000 genomes] |
rs6717899 | 1.00[ASN][1000 genomes] |
rs6723136 | 1.00[ASN][1000 genomes] |
rs6723380 | 1.00[ASN][1000 genomes] |
rs67235968 | 1.00[ASN][1000 genomes] |
rs6724795 | 1.00[ASN][1000 genomes] |
rs6727580 | 1.00[ASN][1000 genomes] |
rs6731631 | 1.00[ASN][1000 genomes] |
rs6731988 | 1.00[ASN][1000 genomes] |
rs6735400 | 1.00[ASN][1000 genomes] |
rs6738521 | 1.00[ASN][1000 genomes] |
rs6740982 | 1.00[ASN][1000 genomes] |
rs6746583 | 1.00[ASN][1000 genomes] |
rs6746586 | 1.00[ASN][1000 genomes] |
rs6755440 | 1.00[ASN][1000 genomes] |
rs68172337 | 1.00[ASN][1000 genomes] |
rs719119 | 1.00[ASN][1000 genomes] |
rs719120 | 1.00[ASN][1000 genomes] |
rs72835256 | 1.00[ASN][1000 genomes] |
rs72835276 | 1.00[ASN][1000 genomes] |
rs72841783 | 1.00[ASN][1000 genomes] |
rs72841795 | 1.00[ASN][1000 genomes] |
rs72904482 | 1.00[ASN][1000 genomes] |
rs72908315 | 1.00[ASN][1000 genomes] |
rs72908317 | 1.00[ASN][1000 genomes] |
rs7558666 | 1.00[ASN][1000 genomes] |
rs7559116 | 1.00[ASN][1000 genomes] |
rs7565358 | 1.00[ASN][1000 genomes] |
rs7569059 | 1.00[ASN][1000 genomes] |
rs7571483 | 1.00[ASN][1000 genomes] |
rs7575090 | 1.00[CEU][hapmap];1.00[ASN][1000 genomes] |
rs7575536 | 1.00[CEU][hapmap];1.00[ASN][1000 genomes] |
rs7577354 | 1.00[ASN][1000 genomes] |
rs7577860 | 1.00[ASN][1000 genomes] |
rs7585598 | 0.82[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs7587370 | 1.00[ASN][1000 genomes] |
rs7591608 | 1.00[ASN][1000 genomes] |
rs7592404 | 1.00[ASN][1000 genomes] |
rs9309465 | 1.00[ASN][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv582207 | chr2:72329603-72389334 | Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Bivalent/Poised TSS Active TSS ZNF genes & repeats Genic enhancers Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site | 7 gene(s) | inside rSNPs | diseases |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr2:72343800-72355000 | Weak transcription | Placenta Amnion | Placenta Amnion |
2 | chr2:72345200-72354600 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
3 | chr2:72352000-72357600 | Weak transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |