Variant report
| Variant | rs55700162 |
|---|---|
| Chromosome Location | chr2:72438883-72438884 |
| allele | G/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr2:72432800-72441600 | Weak transcription | Muscle Satellite Cultured Cells | -- |
| 2 | chr2:72432800-72456600 | Weak transcription | Psoas Muscle | Psoas |
| 3 | chr2:72433000-72441600 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 4 | chr2:72433000-72460600 | Weak transcription | Pancreas | Pancrea |
| 5 | chr2:72433200-72440200 | Weak transcription | Left Ventricle | heart |
| 6 | chr2:72433200-72442200 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 7 | chr2:72433200-72450000 | Weak transcription | Brain Angular Gyrus | brain |
| 8 | chr2:72433200-72450000 | Weak transcription | Brain Cingulate Gyrus | brain |
| 9 | chr2:72433200-72466000 | Weak transcription | Right Ventricle | heart |
| 10 | chr2:72433200-72468600 | Weak transcription | Right Atrium | heart |
| 11 | chr2:72433400-72450200 | Weak transcription | Brain Anterior Caudate | brain |
| 12 | chr2:72433600-72439000 | Weak transcription | Small Intestine | intestine |
| 13 | chr2:72433600-72442000 | Weak transcription | Fetal Stomach | stomach |
| 14 | chr2:72436600-72439000 | Enhancers | A549 | lung |
| 15 | chr2:72437400-72439400 | Enhancers | NHEK | skin |
| 16 | chr2:72437400-72439800 | Enhancers | Rectal Mucosa Donor 31 | rectum |
| 17 | chr2:72437600-72439000 | Enhancers | Stomach Mucosa | stomach |
| 18 | chr2:72437600-72439400 | Enhancers | Fetal Intestine Large | intestine |
| 19 | chr2:72437600-72439400 | Enhancers | Fetal Intestine Small | intestine |
| 20 | chr2:72437600-72439800 | Enhancers | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 21 | chr2:72437800-72439600 | Enhancers | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 22 | chr2:72437800-72440200 | Enhancers | Duodenum Mucosa | Duodenum |
| 23 | chr2:72437800-72440400 | Enhancers | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 24 | chr2:72437800-72440600 | Enhancers | Osteobl | bone |
| 25 | chr2:72438000-72439000 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 26 | chr2:72438000-72440200 | Weak transcription | Colonic Mucosa | Colon |
| 27 | chr2:72438200-72442200 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 28 | chr2:72438200-72446400 | Weak transcription | Fetal Heart | heart |
| 29 | chr2:72438400-72439200 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 30 | chr2:72438400-72440200 | Weak transcription | Esophagus | oesophagus |
| 31 | chr2:72438400-72449800 | Weak transcription | HMEC | breast |
| 32 | chr2:72438600-72439200 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 33 | chr2:72438600-72439600 | Enhancers | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 34 | chr2:72438600-72440600 | Enhancers | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 35 | chr2:72438800-72439000 | Enhancers | NHDF-Ad | bronchial |
| 36 | chr2:72438800-72439200 | Weak transcription | NH-A | brain |
