The 2.0 version of rSNPBase

Variant report

Variant rs10829176
Chromosome Location chr10:27376619-27376620
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:117 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:27283200-27388400 Weak transcription Psoas Muscle Psoas
2 chr10:27291600-27388000 Weak transcription Small Intestine intestine
3 chr10:27313200-27388200 Weak transcription Primary T helper naive cells from peripheral blood blood
4 chr10:27313200-27388600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
5 chr10:27313400-27388400 Weak transcription Placenta Amnion Placenta Amnion
6 chr10:27314600-27388800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
7 chr10:27323400-27388600 Weak transcription H9 Cell Line embryonic stem cell
8 chr10:27326800-27388200 Weak transcription Brain Substantia Nigra brain
9 chr10:27328000-27388200 Weak transcription K562 blood
10 chr10:27330200-27381400 Weak transcription HSMMtube muscle
11 chr10:27333000-27384600 Weak transcription Fetal Heart heart
12 chr10:27350200-27387800 Weak transcription HMEC breast
13 chr10:27358600-27388400 Weak transcription ES-I3 Cell Line embryonic stem cell
14 chr10:27360400-27378800 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
15 chr10:27360400-27383800 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
16 chr10:27360400-27384800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
17 chr10:27360600-27384600 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
18 chr10:27361600-27388200 Weak transcription Primary T killer memory cells from peripheral blood blood
19 chr10:27362200-27388400 Weak transcription Colonic Mucosa Colon
20 chr10:27362400-27377200 Weak transcription Hela-S3 cervix
21 chr10:27362400-27388000 Weak transcription Right Ventricle heart
22 chr10:27362400-27388200 Weak transcription Pancreatic Islets Pancreatic Islet
23 chr10:27362400-27388400 Weak transcription Pancreas Pancrea
24 chr10:27362600-27376800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
25 chr10:27362600-27377600 Weak transcription Rectal Smooth Muscle rectum
26 chr10:27362600-27377800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
27 chr10:27362600-27388400 Weak transcription Esophagus oesophagus
28 chr10:27362600-27388400 Weak transcription Spleen Spleen
29 chr10:27362600-27388800 Weak transcription Gastric stomach
30 chr10:27362800-27382200 Weak transcription Brain Angular Gyrus brain
31 chr10:27362800-27388600 Weak transcription ES-WA7 Cell Line embryonic stem cell
32 chr10:27363000-27378000 Weak transcription Fetal Brain Male brain
33 chr10:27363600-27377200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
34 chr10:27364800-27377200 Weak transcription Colon Smooth Muscle Colon
35 chr10:27365000-27388000 Weak transcription Primary T helper naive cells fromperipheralblood blood
36 chr10:27366400-27377600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
37 chr10:27366600-27376800 Weak transcription NHLF lung
38 chr10:27366600-27377200 Weak transcription Brain Cingulate Gyrus brain
39 chr10:27366600-27381600 Weak transcription HSMM muscle
40 chr10:27366600-27382200 Weak transcription NHEK skin
41 chr10:27366600-27388000 Weak transcription Primary T regulatory cells fromperipheralblood blood
42 chr10:27366600-27388600 Weak transcription Fetal Kidney kidney
43 chr10:27366800-27380800 Weak transcription Primary T helper cells PMA-I stimulated --
44 chr10:27367200-27382600 Weak transcription Primary monocytes fromperipheralblood blood
45 chr10:27367400-27377200 Weak transcription Fetal Thymus thymus
46 chr10:27367400-27388200 Weak transcription Primary B cells from peripheral blood blood
47 chr10:27367600-27388400 Weak transcription Brain Inferior Temporal Lobe brain
48 chr10:27367800-27387800 Weak transcription Primary T killer naive cells fromperipheralblood blood
49 chr10:27368200-27377000 Weak transcription Skeletal Muscle Male skeletal muscle
50 chr10:27368400-27377600 Strong transcription Fetal Adrenal Gland Adrenal Gland

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Last update: Aug 31, 2015