Variant report

Variant	rs3780926
Chromosome Location	chr10:27436295-27436296
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 157 )
Associated
traits (count: 16 )

rSNPs within LD-proxies of this variant (count:156)

rs_ID	r²[population]
rs10458707	1.00[CHB][hapmap];0.93[JPT][hapmap]
rs10734064	0.87[ASN][1000 genomes]
rs10741130	0.90[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10764664	0.80[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.84[ASN][1000 genomes]
rs10764665	0.80[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.84[ASN][1000 genomes]
rs10764667	0.80[CEU][hapmap];1.00[CHB][hapmap];0.86[CHD][hapmap];0.89[GIH][hapmap];0.94[JPT][hapmap];0.85[ASN][1000 genomes]
rs10764668	0.88[AMR][1000 genomes];0.89[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10764669	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.92[YRI][hapmap];0.89[AMR][1000 genomes];0.95[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10764673	0.90[ASN][1000 genomes]
rs10764675	0.92[ASN][1000 genomes]
rs10764676	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10764678	0.82[CEU][hapmap]
rs10764680	0.86[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs10764683	0.80[AMR][1000 genomes];0.96[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10764684	0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10764686	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];0.98[CHD][hapmap];0.91[GIH][hapmap];1.00[LWK][hapmap];0.98[MKK][hapmap];0.98[TSI][hapmap];0.92[YRI][hapmap];0.94[AFR][1000 genomes];0.90[AMR][1000 genomes];0.94[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10829162	0.95[CHB][hapmap]
rs10829163	0.95[CHB][hapmap];0.88[CHD][hapmap]
rs10829167	0.95[CHB][hapmap];0.88[CHD][hapmap]
rs10829172	0.96[CEU][hapmap];0.95[CHB][hapmap];0.95[CHD][hapmap];0.83[GIH][hapmap];0.94[JPT][hapmap];0.95[LWK][hapmap];0.96[MEX][hapmap];0.92[MKK][hapmap];0.98[TSI][hapmap];0.88[AMR][1000 genomes];0.92[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs10829173	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.92[YRI][hapmap];0.88[AMR][1000 genomes];0.95[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs10829174	0.84[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[CHD][hapmap];1.00[GIH][hapmap];0.94[JPT][hapmap];0.95[LWK][hapmap];1.00[MEX][hapmap];0.96[MKK][hapmap];0.98[TSI][hapmap];0.92[YRI][hapmap];0.89[AMR][1000 genomes];0.95[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs10829176	1.00[CEU][hapmap];0.92[YRI][hapmap];0.89[AMR][1000 genomes];0.96[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs10829180	0.89[AMR][1000 genomes];0.96[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs10829181	0.89[AMR][1000 genomes];0.96[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs10829185	0.89[ASN][1000 genomes]
rs10829188	0.92[AMR][1000 genomes];0.95[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10829191	0.90[CHB][hapmap];0.92[ASN][1000 genomes]
rs10829192	0.92[ASN][1000 genomes]
rs10829193	0.92[ASN][1000 genomes]
rs10829197	0.80[AMR][1000 genomes];0.97[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs10829200	0.80[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10829201	1.00[CEU][hapmap];1.00[CHB][hapmap];0.80[AMR][1000 genomes];0.95[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10829202	0.80[AMR][1000 genomes];0.95[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10829208	0.91[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs11015522	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.92[YRI][hapmap];0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs11015529	0.81[ASN][1000 genomes]
rs11015530	0.84[ASN][1000 genomes]
rs11015532	0.86[ASN][1000 genomes]
rs11015538	0.92[ASN][1000 genomes]
rs11015542	0.92[ASN][1000 genomes]
rs11015548	0.92[ASN][1000 genomes]
rs11015549	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11015554	0.92[ASN][1000 genomes]
rs11015555	0.92[ASN][1000 genomes]
rs11015556	0.91[CHB][hapmap];0.92[ASN][1000 genomes]
rs11015558	0.92[ASN][1000 genomes]
rs11015559	0.91[CHB][hapmap];0.80[JPT][hapmap];0.92[ASN][1000 genomes]
rs11015560	0.92[ASN][1000 genomes]
rs11015563	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11015564	0.91[CHB][hapmap];0.80[JPT][hapmap];0.92[ASN][1000 genomes]
rs11015565	0.91[CHB][hapmap];0.92[ASN][1000 genomes]
rs11015566	0.92[ASN][1000 genomes]
rs11015570	1.00[ASW][hapmap];0.92[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.95[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];0.98[MKK][hapmap];1.00[TSI][hapmap];0.92[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11015571	0.91[CHB][hapmap];0.80[JPT][hapmap];0.91[ASN][1000 genomes]
rs11015575	0.97[AFR][1000 genomes];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs11015586	0.83[AMR][1000 genomes];0.91[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11015588	1.00[CEU][hapmap];1.00[CHB][hapmap];0.80[AMR][1000 genomes];0.95[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs11015589	0.88[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs11015590	0.80[AMR][1000 genomes];0.94[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs11015600	0.92[CEU][hapmap];1.00[CHB][hapmap];0.98[CHD][hapmap];0.93[GIH][hapmap];0.96[MEX][hapmap];1.00[TSI][hapmap];0.86[AMR][1000 genomes];0.90[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1148167	0.90[MKK][hapmap]
rs11597298	0.80[AMR][1000 genomes];0.95[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs11813670	0.92[ASN][1000 genomes]
rs12265358	0.80[AMR][1000 genomes];0.96[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs12571792	0.92[ASN][1000 genomes]
rs12572344	0.95[CHB][hapmap];0.92[ASN][1000 genomes]
rs12762457	0.83[ASN][1000 genomes]
rs12766193	0.84[ASN][1000 genomes]
rs12768114	0.82[ASN][1000 genomes]
rs12769335	0.92[ASN][1000 genomes]
rs12784464	0.87[ASN][1000 genomes]
rs1338	0.94[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs1360007	1.00[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1411283	1.00[CHB][hapmap];0.88[CHD][hapmap];0.80[GIH][hapmap];0.94[JPT][hapmap];0.83[MEX][hapmap]
rs1557168	0.94[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs1557169	0.93[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs1557170	0.94[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs1981296	0.96[CEU][hapmap];0.95[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.83[MEX][hapmap];1.00[TSI][hapmap];0.80[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2183334	1.00[CHB][hapmap];0.94[JPT][hapmap]
rs2185808	0.82[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2274634	0.91[CHB][hapmap];1.00[CHD][hapmap];0.80[JPT][hapmap];0.92[ASN][1000 genomes]
rs2274635	0.91[CHB][hapmap];1.00[CHD][hapmap];0.80[JPT][hapmap];0.91[ASN][1000 genomes]
rs2274741	0.95[CHB][hapmap]
rs2274743	0.92[ASN][1000 genomes]
rs2297143	0.91[ASN][1000 genomes]
rs2297145	0.91[CHB][hapmap];0.95[CHD][hapmap];0.81[ASN][1000 genomes]
rs2297147	0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2297151	0.92[ASN][1000 genomes]
rs2297152	0.91[ASN][1000 genomes]
rs2368217	0.91[CHB][hapmap];0.92[ASN][1000 genomes]
rs2887190	0.80[AMR][1000 genomes];0.91[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs35805599	0.86[EUR][1000 genomes]
rs3737055	0.84[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];0.91[CHD][hapmap];1.00[GIH][hapmap];0.94[JPT][hapmap];0.95[LWK][hapmap];0.96[MEX][hapmap];0.92[MKK][hapmap];0.98[TSI][hapmap];0.87[AMR][1000 genomes];0.88[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs3758403	0.88[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs3780920	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3780921	0.91[CHB][hapmap];0.80[JPT][hapmap];0.92[ASN][1000 genomes]
rs3780922	0.91[CHB][hapmap];1.00[CHD][hapmap];0.92[ASN][1000 genomes]
rs3824593	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[YRI][hapmap];0.95[AFR][1000 genomes];0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3904244	0.95[CHB][hapmap]
rs3932559	0.91[CHB][hapmap];0.92[ASN][1000 genomes]
rs4018760	0.88[AMR][1000 genomes];0.97[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs4142123	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4481929	0.84[ASN][1000 genomes]
rs4747585	0.88[ASN][1000 genomes]
rs4747588	0.85[CHB][hapmap]
rs4749213	0.95[CHB][hapmap]
rs4749226	0.92[ASN][1000 genomes]
rs4749240	0.82[ASN][1000 genomes]
rs55741077	0.88[ASN][1000 genomes]
rs61849039	0.82[ASN][1000 genomes]
rs6482596	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6482600	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[YRI][hapmap];0.94[AFR][1000 genomes];0.92[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6482601	1.00[CHB][hapmap];1.00[CHD][hapmap];0.83[GIH][hapmap];1.00[JPT][hapmap];0.83[TSI][hapmap];0.97[ASN][1000 genomes]
rs67425403	0.92[ASN][1000 genomes]
rs7067696	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[YRI][hapmap];1.00[AFR][1000 genomes];0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7068375	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.83[MEX][hapmap];1.00[TSI][hapmap];0.80[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7069942	0.84[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7070117	0.82[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7073381	0.82[ASN][1000 genomes]
rs7079282	0.86[AMR][1000 genomes];0.88[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs7079792	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.80[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7079885	0.80[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7083768	0.91[CHB][hapmap]
rs7086311	0.91[CHB][hapmap];0.95[CHD][hapmap];0.84[ASN][1000 genomes]
rs7086553	0.96[CEU][hapmap];1.00[CHB][hapmap];0.98[CHD][hapmap];0.93[GIH][hapmap];0.83[MEX][hapmap];1.00[TSI][hapmap];0.90[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7087082	0.95[CHB][hapmap];0.88[CHD][hapmap];0.87[GIH][hapmap];0.94[JPT][hapmap]
rs7088171	0.95[CHB][hapmap]
rs7091128	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];0.83[MEX][hapmap];1.00[TSI][hapmap];0.80[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7091723	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.80[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7097009	0.80[CEU][hapmap];1.00[CHB][hapmap];0.88[CHD][hapmap];0.89[GIH][hapmap];0.94[JPT][hapmap];0.91[MEX][hapmap]
rs7477806	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7894187	0.85[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7896012	0.92[ASN][1000 genomes]
rs7897241	0.90[AFR][1000 genomes];0.92[AMR][1000 genomes];0.95[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7900024	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.87[MEX][hapmap];1.00[TSI][hapmap];0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7901653	0.92[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.98[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];0.96[MEX][hapmap];0.98[MKK][hapmap];1.00[TSI][hapmap];0.92[YRI][hapmap];0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7901976	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7909135	0.84[CEU][hapmap]
rs7909684	0.88[AMR][1000 genomes];0.95[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7910367	0.90[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7910430	0.88[CEU][hapmap];1.00[CHB][hapmap];0.89[JPT][hapmap];0.81[AMR][1000 genomes];0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7910688	0.91[CHB][hapmap];1.00[CHD][hapmap];0.80[JPT][hapmap];0.92[ASN][1000 genomes]
rs7914630	0.90[CHB][hapmap];0.92[ASN][1000 genomes]
rs7918395	0.89[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7919523	0.80[JPT][hapmap];0.83[ASN][1000 genomes]
rs7919621	1.00[CHB][hapmap];0.88[CHD][hapmap];0.80[GIH][hapmap];0.94[JPT][hapmap]
rs7921980	0.92[ASN][1000 genomes]
rs7922972	0.83[CEU][hapmap]
rs7924231	0.91[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs882474	1.00[CEU][hapmap];1.00[CHB][hapmap];0.98[CHD][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];0.83[MEX][hapmap];1.00[TSI][hapmap];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs882475	0.84[CEU][hapmap];0.81[TSI][hapmap]
rs9299837	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.80[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9651378	0.91[CHB][hapmap]
rs9971193	0.92[ASN][1000 genomes]
rs9971335	0.85[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2422253	chr10:27431366-27575370	Strong transcription Genic enhancers Active TSS Weak transcription Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	32 gene(s)	inside rSNPs	diseases

mRNA abundance (count:16)

SNP	Gene	Cis/trans	Tissue	Source
rs3780926	MASTL	cis	Nerve Tibial	GTEx
rs3780926	ACBD5	cis	cerebellum	SCAN
rs3780926	MASTL	cis	cerebellum	SCAN
rs3780926	RAB18	cis	parietal	SCAN
rs3780926	MASTL	cis	Esophagus Muscularis	GTEx
rs3780926	MASTL	cis	Whole Blood	GTEx
rs3780926	MASTL	cis	Artery Tibial	GTEx
rs3780926	MASTL	cis	Thyroid	GTEx
rs3780926	LOC387646	cis	cerebellum	SCAN
rs3780926	MASTL	cis	lung	GTEx
rs3780926	MASTL	cis	lymphoblastoid	seeQTL
rs3780926	MASTL	cis	Muscle Skeletal	GTEx
rs3780926	YME1L1	Cis_1M	lymphoblastoid	RTeQTL
rs3780926	MASTL	cis	Skin Sun Exposed Lower leg	GTEx
rs3780926	ANKRD26	cis	parietal	SCAN
rs3780926	MASTL	cis	Adipose Subcutaneous	GTEx

Chromatin state (count:127 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:27389800-27441200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr10:27390000-27442000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
3	chr10:27393800-27438600	Strong transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
4	chr10:27395400-27437800	Strong transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
5	chr10:27396200-27440600	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
6	chr10:27397600-27438600	Strong transcription	Fetal Thymus	thymus
7	chr10:27398600-27436400	Strong transcription	Dnd41	blood
8	chr10:27398800-27438200	Strong transcription	Primary T helper cells fromperipheralblood	blood
9	chr10:27398800-27438200	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
10	chr10:27399600-27438400	Strong transcription	Primary T regulatory cells fromperipheralblood	blood
11	chr10:27399800-27438600	Strong transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
12	chr10:27400400-27438400	Strong transcription	Liver	Liver
13	chr10:27407800-27436400	Weak transcription	Right Ventricle	heart
14	chr10:27412400-27440200	Weak transcription	Fetal Heart	heart
15	chr10:27418000-27436400	Weak transcription	Spleen	Spleen
16	chr10:27419200-27438600	Strong transcription	Monocytes-CD14+_RO01746	blood
17	chr10:27419200-27438800	Strong transcription	Primary monocytes fromperipheralblood	blood
18	chr10:27419400-27441400	Weak transcription	Stomach Mucosa	stomach
19	chr10:27423400-27436400	Weak transcription	Colonic Mucosa	Colon
20	chr10:27424000-27436400	Weak transcription	Small Intestine	intestine
21	chr10:27427000-27438600	Strong transcription	HUES6 Cell Line	embryonic stem cell
22	chr10:27427200-27436600	Strong transcription	Primary T cells fromperipheralblood	blood
23	chr10:27427200-27438000	Strong transcription	Breast Myoepithelial Primary Cells	Breast
24	chr10:27427200-27438400	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
25	chr10:27427600-27438000	Strong transcription	Rectal Mucosa Donor 29	rectum
26	chr10:27428000-27438000	Strong transcription	H1 Cell Line	embryonic stem cell
27	chr10:27428000-27438600	Strong transcription	Primary mononuclear cells fromperipheralblood	Blood
28	chr10:27428000-27438800	Strong transcription	Fetal Intestine Large	intestine
29	chr10:27428000-27439000	Strong transcription	IMR90 fetal lung fibroblasts Cell Line	lung
30	chr10:27428000-27441400	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
31	chr10:27428200-27437800	Strong transcription	Primary T helper 17 cells PMA-I stimulated	--
32	chr10:27428200-27438000	Strong transcription	Primary B cells from peripheral blood	blood
33	chr10:27428200-27438200	Strong transcription	Duodenum Mucosa	Duodenum
34	chr10:27428200-27438600	Strong transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
35	chr10:27428800-27438800	Strong transcription	Fetal Muscle Trunk	muscle
36	chr10:27429000-27436400	Strong transcription	Primary neutrophils fromperipheralblood	blood
37	chr10:27429600-27438000	Strong transcription	ES-UCSF4 Cell Line	embryonic stem cell
38	chr10:27429600-27438600	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
39	chr10:27429800-27438200	Strong transcription	HSMM	muscle
40	chr10:27429800-27438400	Strong transcription	Adipose Nuclei	Adipose
41	chr10:27430000-27438000	Strong transcription	Rectal Mucosa Donor 31	rectum
42	chr10:27430400-27438000	Strong transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
43	chr10:27431600-27436600	Weak transcription	Hela-S3	cervix
44	chr10:27431800-27437800	Strong transcription	Fetal Brain Female	brain
45	chr10:27431800-27438600	Strong transcription	Primary T cells from cord blood	blood
46	chr10:27431800-27440400	Strong transcription	Primary hematopoietic stem cells short term culture	blood
47	chr10:27431800-27442000	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
48	chr10:27432000-27438000	Strong transcription	Fetal Lung	lung
49	chr10:27432000-27438000	Strong transcription	HUVEC	blood vessel
50	chr10:27432000-27438200	Strong transcription	NHEK	skin

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links