Variant report

Variant	rs7910430
Chromosome Location	chr10:27384247-27384248
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 166 )
Associated
traits (count: 10 )

rSNPs within LD-proxies of this variant (count:166)

rs_ID	r²[population]
rs10458707	1.00[CHB][hapmap];0.94[JPT][hapmap];0.83[YRI][hapmap];0.82[ASN][1000 genomes]
rs10734064	0.81[AMR][1000 genomes];0.99[ASN][1000 genomes]
rs10741126	0.85[ASN][1000 genomes]
rs10741130	0.83[EUR][1000 genomes]
rs10764663	0.88[ASN][1000 genomes]
rs10764664	1.00[CHB][hapmap];0.95[JPT][hapmap];0.82[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs10764665	1.00[CHB][hapmap];0.95[JPT][hapmap];0.82[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs10764667	1.00[CHB][hapmap];0.94[JPT][hapmap];0.82[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs10764668	0.91[AMR][1000 genomes];0.88[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10764669	0.88[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];0.92[AMR][1000 genomes];0.94[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10764675	0.81[ASN][1000 genomes]
rs10764676	0.81[AMR][1000 genomes];0.91[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs10764678	0.87[CEU][hapmap]
rs10764683	0.88[EUR][1000 genomes]
rs10764684	0.86[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs10764686	0.88[CEU][hapmap];1.00[CHB][hapmap];0.86[EUR][1000 genomes]
rs10829161	0.87[ASN][1000 genomes]
rs10829162	0.96[CHB][hapmap]
rs10829163	0.95[CHB][hapmap];0.81[ASN][1000 genomes]
rs10829164	0.81[ASN][1000 genomes]
rs10829166	0.88[ASN][1000 genomes]
rs10829167	0.95[CHB][hapmap];0.81[ASN][1000 genomes]
rs10829172	0.92[CEU][hapmap];0.95[CHB][hapmap];0.94[JPT][hapmap];0.91[AMR][1000 genomes];0.91[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10829173	0.87[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];0.90[AMR][1000 genomes];0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10829174	0.88[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.92[AMR][1000 genomes];0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10829176	0.88[CEU][hapmap];0.92[AMR][1000 genomes];0.95[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10829180	0.92[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10829181	0.92[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10829188	0.80[AFR][1000 genomes];0.85[AMR][1000 genomes];0.98[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs10829191	0.91[CHB][hapmap];0.81[ASN][1000 genomes]
rs10829192	0.81[ASN][1000 genomes]
rs10829193	0.81[ASN][1000 genomes]
rs10829197	0.90[EUR][1000 genomes]
rs10829200	0.87[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs10829201	0.86[CEU][hapmap];1.00[CHB][hapmap];0.87[EUR][1000 genomes]
rs10829202	0.87[EUR][1000 genomes]
rs10829208	0.84[EUR][1000 genomes]
rs11015461	0.81[ASN][1000 genomes]
rs11015522	0.88[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];0.92[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11015529	0.92[ASN][1000 genomes]
rs11015530	0.89[ASN][1000 genomes]
rs11015532	0.86[ASN][1000 genomes]
rs11015538	0.81[ASN][1000 genomes]
rs11015542	0.81[ASN][1000 genomes]
rs11015548	0.81[ASN][1000 genomes]
rs11015549	0.81[AMR][1000 genomes];0.91[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs11015554	0.81[ASN][1000 genomes]
rs11015555	0.81[ASN][1000 genomes]
rs11015556	0.91[CHB][hapmap];0.81[ASN][1000 genomes]
rs11015558	0.81[ASN][1000 genomes]
rs11015559	0.91[CHB][hapmap];0.81[ASN][1000 genomes]
rs11015560	0.81[ASN][1000 genomes]
rs11015563	0.81[AMR][1000 genomes];0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs11015564	0.91[CHB][hapmap];0.81[ASN][1000 genomes]
rs11015565	0.91[CHB][hapmap];0.81[ASN][1000 genomes]
rs11015566	0.81[ASN][1000 genomes]
rs11015570	1.00[CHB][hapmap];0.89[JPT][hapmap];0.81[AMR][1000 genomes];0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs11015571	0.91[CHB][hapmap]
rs11015575	0.90[EUR][1000 genomes]
rs11015586	0.91[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs11015588	0.88[CEU][hapmap];1.00[CHB][hapmap];0.87[EUR][1000 genomes]
rs11015589	0.81[EUR][1000 genomes]
rs11015590	0.86[EUR][1000 genomes]
rs11015600	0.80[CEU][hapmap];1.00[CHB][hapmap];0.83[EUR][1000 genomes]
rs11592897	0.85[ASN][1000 genomes]
rs11597298	0.87[EUR][1000 genomes]
rs11813670	0.81[ASN][1000 genomes]
rs12265358	0.88[EUR][1000 genomes]
rs12571792	0.81[ASN][1000 genomes]
rs12572344	0.95[CHB][hapmap];0.81[ASN][1000 genomes]
rs12766193	0.89[ASN][1000 genomes]
rs12768114	0.88[ASN][1000 genomes]
rs12769335	0.81[ASN][1000 genomes]
rs12784464	0.84[ASN][1000 genomes]
rs1338	0.86[EUR][1000 genomes]
rs1360007	0.80[AMR][1000 genomes];0.92[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1411283	1.00[CHB][hapmap];0.94[JPT][hapmap];0.85[ASN][1000 genomes]
rs1557168	0.86[EUR][1000 genomes]
rs1557169	0.86[EUR][1000 genomes]
rs1557170	0.86[EUR][1000 genomes]
rs1963735	0.85[ASN][1000 genomes]
rs1981296	0.84[CEU][hapmap];0.95[CHB][hapmap];0.88[JPT][hapmap];0.87[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2026120	0.84[ASN][1000 genomes]
rs2183334	1.00[CHB][hapmap];0.95[JPT][hapmap];0.87[ASN][1000 genomes]
rs2185808	0.88[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs2274634	0.91[CHB][hapmap];0.81[ASN][1000 genomes]
rs2274635	0.91[CHB][hapmap];0.80[ASN][1000 genomes]
rs2274741	0.96[CHB][hapmap]
rs2274743	0.81[ASN][1000 genomes]
rs2297143	0.80[ASN][1000 genomes]
rs2297145	0.91[CHB][hapmap];0.92[ASN][1000 genomes]
rs2297147	0.92[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2297151	0.81[ASN][1000 genomes]
rs2297152	0.80[ASN][1000 genomes]
rs2368217	0.91[CHB][hapmap];0.81[ASN][1000 genomes]
rs2887190	0.84[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs34844053	0.81[ASN][1000 genomes]
rs35995872	0.81[ASN][1000 genomes]
rs3737055	0.88[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.88[AMR][1000 genomes];0.87[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs3758403	0.81[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs3780920	0.88[CEU][hapmap];1.00[CHB][hapmap];0.89[JPT][hapmap];0.81[AMR][1000 genomes];0.91[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs3780921	0.91[CHB][hapmap];0.81[ASN][1000 genomes]
rs3780922	0.91[CHB][hapmap];0.81[ASN][1000 genomes]
rs3780926	0.88[CEU][hapmap];1.00[CHB][hapmap];0.89[JPT][hapmap];0.81[AMR][1000 genomes];0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs3781100	0.89[ASN][1000 genomes]
rs3824593	0.87[CEU][hapmap];1.00[CHB][hapmap];0.88[JPT][hapmap];0.80[AMR][1000 genomes];0.91[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs3824691	0.81[ASN][1000 genomes]
rs3904244	0.96[CHB][hapmap];0.90[ASN][1000 genomes]
rs3932559	0.91[CHB][hapmap];0.81[ASN][1000 genomes]
rs4018760	0.91[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4142123	0.81[AMR][1000 genomes];0.94[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs4481929	0.95[ASN][1000 genomes]
rs4747581	0.81[ASN][1000 genomes]
rs4747585	0.85[ASN][1000 genomes]
rs4747588	0.85[CHB][hapmap]
rs4749213	0.96[CHB][hapmap]
rs4749225	0.89[ASN][1000 genomes]
rs4749226	0.81[ASN][1000 genomes]
rs55741077	0.85[ASN][1000 genomes]
rs6482585	0.85[ASN][1000 genomes]
rs6482596	0.85[CEU][hapmap];1.00[CHB][hapmap];0.89[JPT][hapmap];0.81[AMR][1000 genomes];0.92[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6482600	0.88[CEU][hapmap];1.00[CHB][hapmap];0.89[JPT][hapmap];0.87[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs6482601	1.00[CHB][hapmap];0.89[JPT][hapmap];0.86[ASN][1000 genomes]
rs67425403	0.81[ASN][1000 genomes]
rs7067696	0.88[CEU][hapmap];1.00[CHB][hapmap];0.89[JPT][hapmap];0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7068375	0.88[CEU][hapmap];1.00[CHB][hapmap];0.89[JPT][hapmap];0.90[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7069942	0.92[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7070117	0.91[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7073381	0.90[ASN][1000 genomes]
rs7079282	0.81[EUR][1000 genomes]
rs7079792	0.88[CEU][hapmap];1.00[CHB][hapmap];0.89[JPT][hapmap];0.87[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7079885	0.87[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7083768	0.91[CHB][hapmap];0.90[ASN][1000 genomes]
rs7086311	0.91[CHB][hapmap];0.89[ASN][1000 genomes]
rs7086553	0.84[CEU][hapmap];1.00[CHB][hapmap];0.83[EUR][1000 genomes]
rs7086820	0.90[ASN][1000 genomes]
rs7087082	0.95[CHB][hapmap];0.94[JPT][hapmap];0.88[ASN][1000 genomes]
rs7088171	0.96[CHB][hapmap]
rs7091128	0.88[CEU][hapmap];1.00[CHB][hapmap];0.89[JPT][hapmap];0.87[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7091723	0.88[CEU][hapmap];1.00[CHB][hapmap];0.84[JPT][hapmap];0.87[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7097009	1.00[CHB][hapmap];0.94[JPT][hapmap];0.88[ASN][1000 genomes]
rs7477806	0.81[AMR][1000 genomes];0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7894187	0.82[ASN][1000 genomes]
rs7896012	0.81[ASN][1000 genomes]
rs7897241	0.87[EUR][1000 genomes]
rs7900024	0.88[CEU][hapmap];1.00[CHB][hapmap];0.89[JPT][hapmap];0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7901653	0.88[CEU][hapmap];1.00[CHB][hapmap];0.89[JPT][hapmap];0.81[AMR][1000 genomes];0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7901840	0.87[ASN][1000 genomes]
rs7901976	0.81[AMR][1000 genomes];0.94[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7902690	0.90[ASN][1000 genomes]
rs7909135	0.89[CEU][hapmap]
rs7909684	0.91[AMR][1000 genomes];0.94[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7910367	0.83[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs7910688	0.91[CHB][hapmap];0.81[ASN][1000 genomes]
rs7914630	0.91[CHB][hapmap];0.81[ASN][1000 genomes]
rs7918395	0.82[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs7919621	1.00[CHB][hapmap];0.94[JPT][hapmap];0.85[ASN][1000 genomes]
rs7921980	0.81[ASN][1000 genomes]
rs7922972	0.87[CEU][hapmap]
rs7924231	0.84[EUR][1000 genomes]
rs882474	0.88[CEU][hapmap];1.00[CHB][hapmap];0.89[JPT][hapmap];0.86[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs882475	0.88[CEU][hapmap]
rs9299837	0.88[CEU][hapmap];1.00[CHB][hapmap];0.89[JPT][hapmap];0.87[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs9651378	0.91[CHB][hapmap];0.89[ASN][1000 genomes]
rs9971193	0.81[ASN][1000 genomes]
rs9971335	0.85[ASN][1000 genomes]

mRNA abundance (count:10)

SNP	Gene	Cis/trans	Tissue	Source
rs7910430	MASTL	cis	Esophagus Muscularis	GTEx
rs7910430	MASTL	cis	Adipose Subcutaneous	GTEx
rs7910430	MASTL	cis	Skin Sun Exposed Lower leg	GTEx
rs7910430	MASTL	cis	Thyroid	GTEx
rs7910430	MASTL	cis	Artery Tibial	GTEx
rs7910430	MASTL	cis	lung	GTEx
rs7910430	YME1L1	Cis_1M	lymphoblastoid	RTeQTL
rs7910430	MASTL	cis	Whole Blood	GTEx
rs7910430	MASTL	cis	Nerve Tibial	GTEx
rs7910430	MASTL	cis	Muscle Skeletal	GTEx

Chromatin state (count:117 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:27283200-27388400	Weak transcription	Psoas Muscle	Psoas
2	chr10:27291600-27388000	Weak transcription	Small Intestine	intestine
3	chr10:27313200-27388200	Weak transcription	Primary T helper naive cells from peripheral blood	blood
4	chr10:27313200-27388600	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
5	chr10:27313400-27388400	Weak transcription	Placenta Amnion	Placenta Amnion
6	chr10:27314600-27388800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
7	chr10:27323400-27388600	Weak transcription	H9 Cell Line	embryonic stem cell
8	chr10:27326800-27388200	Weak transcription	Brain Substantia Nigra	brain
9	chr10:27328000-27388200	Weak transcription	K562	blood
10	chr10:27333000-27384600	Weak transcription	Fetal Heart	heart
11	chr10:27350200-27387800	Weak transcription	HMEC	breast
12	chr10:27358600-27388400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
13	chr10:27360400-27384800	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
14	chr10:27360600-27384600	Strong transcription	Foreskin Melanocyte Primary Cells skin03	Skin
15	chr10:27361600-27388200	Weak transcription	Primary T killer memory cells from peripheral blood	blood
16	chr10:27362200-27388400	Weak transcription	Colonic Mucosa	Colon
17	chr10:27362400-27388000	Weak transcription	Right Ventricle	heart
18	chr10:27362400-27388200	Weak transcription	Pancreatic Islets	Pancreatic Islet
19	chr10:27362400-27388400	Weak transcription	Pancreas	Pancrea
20	chr10:27362600-27388400	Weak transcription	Esophagus	oesophagus
21	chr10:27362600-27388400	Weak transcription	Spleen	Spleen
22	chr10:27362600-27388800	Weak transcription	Gastric	stomach
23	chr10:27362800-27388600	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
24	chr10:27365000-27388000	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
25	chr10:27366600-27388000	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
26	chr10:27366600-27388600	Weak transcription	Fetal Kidney	kidney
27	chr10:27367400-27388200	Weak transcription	Primary B cells from peripheral blood	blood
28	chr10:27367600-27388400	Weak transcription	Brain Inferior Temporal Lobe	brain
29	chr10:27367800-27387800	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
30	chr10:27369800-27388200	Weak transcription	NHDF-Ad	bronchial
31	chr10:27370000-27388600	Weak transcription	Aorta	Aorta
32	chr10:27376800-27384600	Strong transcription	Fetal Intestine Large	intestine
33	chr10:27377200-27388200	Weak transcription	NHLF	lung
34	chr10:27378000-27387800	Weak transcription	Brain Hippocampus Middle	brain
35	chr10:27378000-27388400	Weak transcription	iPS-18 Cell Line	embryonic stem cell
36	chr10:27378200-27387800	Weak transcription	Primary T cells fromperipheralblood	blood
37	chr10:27378200-27388000	Weak transcription	Duodenum Mucosa	Duodenum
38	chr10:27378200-27388000	Weak transcription	Fetal Brain Male	brain
39	chr10:27378200-27388200	Weak transcription	Rectal Smooth Muscle	rectum
40	chr10:27378200-27388400	Weak transcription	Primary B cells from cord blood	blood
41	chr10:27378200-27388400	Weak transcription	Rectal Mucosa Donor 31	rectum
42	chr10:27378400-27387800	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
43	chr10:27378400-27387800	Weak transcription	Brain Cingulate Gyrus	brain
44	chr10:27378400-27387800	Weak transcription	HepG2	liver
45	chr10:27378600-27388000	Weak transcription	Thymus	Thymus
46	chr10:27378600-27388200	Weak transcription	HUVEC	blood vessel
47	chr10:27378800-27386600	Weak transcription	Lung	lung
48	chr10:27378800-27388000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
49	chr10:27378800-27388000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
50	chr10:27378800-27388000	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain

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