Variant report

Variant	rs7900024
Chromosome Location	chr10:27444763-27444764
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:185)
CpG islands
(count:0)
Chromatin interactive
region (count:6)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:185 , 50 per page) page: 1 2 3 4

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	POLR2A	chr10:27442481-27445646	MCF10A-Er-Src	breast:	n/a	n/a
2	CEBPB	chr10:27444645-27445124	A549	lung:	n/a	n/a
3	POLR2A	chr10:27443752-27445177	ECC-1	luminal epithelium:	n/a	n/a
4	MXI1	chr10:27442288-27445640	SK-N-SH	brain:	n/a	n/a
5	HCFC1	chr10:27443849-27445289	Hela-S3	cervix:	n/a	n/a
6	YY1	chr10:27443899-27445186	K562	blood:	n/a	chr10:27444264-27444278
7	CEBPB	chr10:27444727-27445129	HepG2	liver:	n/a	n/a
8	POLR2A	chr10:27444495-27445144	H1-hESC	embryonic stem cell:	n/a	n/a
9	POLR2A	chr10:27442676-27445300	K562	blood:	n/a	n/a
10	POLR2A	chr10:27444725-27445340	Hela-S3	cervix:	n/a	n/a
11	TAF1	chr10:27443720-27444840	ECC-1	luminal epithelium:	n/a	n/a
12	ATF1	chr10:27443936-27444775	K562	blood:	n/a	chr10:27444241-27444255
13	RUNX3	chr10:27444602-27445018	GM12878	blood:	n/a	n/a
14	IRF1	chr10:27444746-27444996	K562	blood:	n/a	n/a
15	PAX5	chr10:27444475-27444817	GM12878	blood:	n/a	n/a
16	POLR2A	chr10:27442747-27445340	GM18505	blood:	n/a	n/a
17	POLR2A	chr10:27442590-27445235	H1-hESC	embryonic stem cell:	n/a	n/a
18	TAF1	chr10:27442685-27445138	H1-hESC	embryonic stem cell:	n/a	n/a
19	POLR2A	chr10:27442720-27445302	GM12891	blood:	n/a	n/a
20	SIN3AK20	chr10:27444646-27444911	A549	lung:	n/a	n/a
21	HMGN3	chr10:27444022-27445140	K562	blood:	n/a	n/a
22	TBL1XR1	chr10:27442547-27444890	K562	blood:	n/a	n/a
23	TAF1	chr10:27443779-27444880	K562	blood:	n/a	n/a
24	POLR2A	chr10:27444723-27445239	HCT-116	colon:	n/a	n/a
25	TEAD4	chr10:27443592-27445033	K562	blood:	n/a	n/a
26	MAX	chr10:27442654-27445195	K562	blood:	n/a	chr10:27444264-27444273
27	TBP	chr10:27444742-27444983	HepG2	liver:	n/a	n/a
28	POLR2A	chr10:27444658-27445285	K562	blood:	n/a	n/a
29	RELA	chr10:27443068-27445018	GM19193	blood:	n/a	n/a
30	CHD1	chr10:27441735-27445646	IMR90	lung:	n/a	n/a
31	SP1	chr10:27443057-27444899	A549	lung:	n/a	chr10:27444266-27444278 chr10:27444266-27444278
32	YY1	chr10:27443784-27445131	GM12878	blood:	n/a	chr10:27444264-27444278
33	TBP	chr10:27442755-27444955	H1-hESC	embryonic stem cell:	n/a	n/a
34	MYC	chr10:27442648-27445323	K562	blood:	n/a	chr10:27444264-27444273
35	POLR2A	chr10:27442755-27445310	GM12878	blood:	n/a	n/a
36	JUND	chr10:27442734-27445243	K562	blood:	n/a	n/a
37	CEBPB	chr10:27444540-27445197	MCF-7	breast:	n/a	n/a
38	PML	chr10:27442615-27445048	GM12878	blood:	n/a	n/a
39	KAP1	chr10:27442850-27444961	HEK293	kidney:	n/a	n/a
40	MAX	chr10:27443737-27444782	A549	lung:	n/a	chr10:27444264-27444273
41	POLR2A	chr10:27443033-27445132	NB4	blood:	n/a	n/a
42	POLR2A	chr10:27442701-27445350	PFSK-1	brain:	n/a	n/a
43	HCFC1	chr10:27442820-27445014	K562	blood:	n/a	n/a
44	POLR2A	chr10:27442752-27445253	GM18951	blood:	n/a	n/a
45	SIN3AK20	chr10:27442752-27445180	HCT-116	colon:	n/a	n/a
46	CEBPB	chr10:27444631-27445186	ECC-1	luminal epithelium:	n/a	n/a
47	POLR2A	chr10:27442640-27445329	GM12892	blood:	n/a	n/a
48	YY1	chr10:27444591-27444849	K562	blood:	n/a	n/a
49	POLR2A	chr10:27443773-27445206	MCF-7	breast:	n/a	n/a
50	TAF1	chr10:27443751-27444998	ECC-1	luminal epithelium:	n/a	n/a

No data

(count:6 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr10:27149519..27151430-chr10:27442633..27444807,2	K562	blood:
2	chr10:27442535..27445982-chr10:27528407..27534290,13	K562	blood:
3	chr1:145382389..145383023-chr10:27444086..27444882,2	Hela-S3	cervix:
4	chr10:27441850..27444956-chr10:27527496..27532549,10	MCF-7	breast:
5	chr10:27442176..27446829-chr10:27524472..27534671,19	K562	blood:
6	chr10:27441114..27446089-chr10:27527560..27532728,23	MCF-7	breast:

No data

Variant related genes	Relation type
YME1L1	TF binding region
ENSG00000136754	Chromatin interaction
ENSG00000233396	Chromatin interaction
ENSG00000262412	Chromatin interaction
ENSG00000263577	Chromatin interaction
ENSG00000107897	Chromatin interaction
ENSG00000201558	Chromatin interaction

Extended variants
information (count: 159 )
Associated
traits (count: 18 )

rSNPs within LD-proxies of this variant (count:158)

rs_ID	r²[population]
rs10458707	1.00[CHB][hapmap];0.93[JPT][hapmap]
rs10458708	0.83[AMR][1000 genomes]
rs10734064	0.87[ASN][1000 genomes]
rs10741130	0.86[AFR][1000 genomes];0.92[AMR][1000 genomes];0.90[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10764664	0.80[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.84[ASN][1000 genomes]
rs10764665	0.80[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.84[ASN][1000 genomes]
rs10764667	0.80[CEU][hapmap];1.00[CHB][hapmap];0.86[CHD][hapmap];0.89[GIH][hapmap];0.94[JPT][hapmap];0.85[ASN][1000 genomes]
rs10764668	0.80[AMR][1000 genomes];0.89[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10764669	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.81[AMR][1000 genomes];0.95[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10764673	0.90[ASN][1000 genomes]
rs10764675	0.92[ASN][1000 genomes]
rs10764676	0.85[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10764678	0.82[CEU][hapmap];0.81[AMR][1000 genomes]
rs10764680	0.86[AMR][1000 genomes];0.86[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs10764683	0.84[AFR][1000 genomes];0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10764684	0.89[AFR][1000 genomes];0.92[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10764686	1.00[CEU][hapmap];1.00[CHB][hapmap];0.98[CHD][hapmap];0.91[GIH][hapmap];0.98[TSI][hapmap];0.82[AMR][1000 genomes];0.94[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10829162	0.95[CHB][hapmap]
rs10829163	0.95[CHB][hapmap];0.88[CHD][hapmap]
rs10829167	0.95[CHB][hapmap];0.88[CHD][hapmap]
rs10829172	0.96[CEU][hapmap];0.95[CHB][hapmap];0.95[CHD][hapmap];0.83[GIH][hapmap];0.94[JPT][hapmap];0.83[MEX][hapmap];0.98[TSI][hapmap];0.80[AMR][1000 genomes];0.92[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs10829173	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.80[AMR][1000 genomes];0.95[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs10829174	1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[CHD][hapmap];1.00[GIH][hapmap];0.94[JPT][hapmap];0.87[MEX][hapmap];0.98[TSI][hapmap];0.81[AMR][1000 genomes];0.95[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs10829176	1.00[CEU][hapmap];0.81[AMR][1000 genomes];0.96[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs10829180	0.81[AMR][1000 genomes];0.96[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs10829181	0.81[AMR][1000 genomes];0.96[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs10829185	0.89[ASN][1000 genomes]
rs10829188	0.95[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10829191	0.90[CHB][hapmap];0.92[ASN][1000 genomes]
rs10829192	0.92[ASN][1000 genomes]
rs10829193	0.92[ASN][1000 genomes]
rs10829197	0.87[AFR][1000 genomes];0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs10829200	0.87[AFR][1000 genomes];0.94[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10829201	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[YRI][hapmap];0.86[AFR][1000 genomes];0.94[AMR][1000 genomes];0.95[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10829202	0.86[AFR][1000 genomes];0.94[AMR][1000 genomes];0.95[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10829208	0.84[AFR][1000 genomes];0.88[AMR][1000 genomes];0.91[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs11015522	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.81[AMR][1000 genomes];0.97[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs11015529	0.81[ASN][1000 genomes]
rs11015530	0.84[ASN][1000 genomes]
rs11015532	0.86[ASN][1000 genomes]
rs11015538	0.92[ASN][1000 genomes]
rs11015542	0.92[ASN][1000 genomes]
rs11015548	0.92[ASN][1000 genomes]
rs11015549	0.85[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11015554	0.92[ASN][1000 genomes]
rs11015555	0.92[ASN][1000 genomes]
rs11015556	0.91[CHB][hapmap];0.92[ASN][1000 genomes]
rs11015558	0.92[ASN][1000 genomes]
rs11015559	0.91[CHB][hapmap];0.80[JPT][hapmap];0.92[ASN][1000 genomes]
rs11015560	0.92[ASN][1000 genomes]
rs11015563	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11015564	0.91[CHB][hapmap];0.80[JPT][hapmap];0.92[ASN][1000 genomes]
rs11015565	0.91[CHB][hapmap];0.92[ASN][1000 genomes]
rs11015566	0.92[ASN][1000 genomes]
rs11015570	0.92[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.95[GIH][hapmap];1.00[JPT][hapmap];0.87[MEX][hapmap];1.00[TSI][hapmap];0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11015571	0.91[CHB][hapmap];0.80[JPT][hapmap];0.91[ASN][1000 genomes]
rs11015575	0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs11015586	0.91[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11015588	1.00[CEU][hapmap];1.00[CHB][hapmap];0.93[YRI][hapmap];0.84[AFR][1000 genomes];0.94[AMR][1000 genomes];0.95[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs11015589	0.87[AMR][1000 genomes];0.88[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs11015590	0.89[AFR][1000 genomes];0.94[AMR][1000 genomes];0.94[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs11015600	0.92[CEU][hapmap];1.00[CHB][hapmap];0.98[CHD][hapmap];0.93[GIH][hapmap];0.92[MEX][hapmap];1.00[TSI][hapmap];0.90[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs11597298	0.86[AFR][1000 genomes];0.94[AMR][1000 genomes];0.95[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs11813670	0.92[ASN][1000 genomes]
rs12265358	0.86[AFR][1000 genomes];0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs12571792	0.92[ASN][1000 genomes]
rs12572344	0.95[CHB][hapmap];0.92[ASN][1000 genomes]
rs12762457	0.83[ASN][1000 genomes]
rs12766193	0.84[ASN][1000 genomes]
rs12768114	0.82[ASN][1000 genomes]
rs12769335	0.92[ASN][1000 genomes]
rs12784464	0.87[ASN][1000 genomes]
rs1328602	0.83[MEX][hapmap];0.81[MKK][hapmap]
rs1338	0.86[AFR][1000 genomes];0.92[AMR][1000 genomes];0.94[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs1360007	0.84[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1411283	1.00[CHB][hapmap];0.88[CHD][hapmap];0.80[GIH][hapmap];0.94[JPT][hapmap]
rs1557168	0.86[AFR][1000 genomes];0.92[AMR][1000 genomes];0.94[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs1557169	0.84[AFR][1000 genomes];0.91[AMR][1000 genomes];0.93[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs1557170	0.86[AFR][1000 genomes];0.92[AMR][1000 genomes];0.94[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs1981296	1.00[ASW][hapmap];0.96[CEU][hapmap];0.95[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.96[LWK][hapmap];0.96[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];0.96[YRI][hapmap];0.89[AFR][1000 genomes];0.94[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2183334	1.00[CHB][hapmap];0.94[JPT][hapmap]
rs2185808	0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2274634	0.91[CHB][hapmap];1.00[CHD][hapmap];0.80[JPT][hapmap];0.92[ASN][1000 genomes]
rs2274635	0.91[CHB][hapmap];1.00[CHD][hapmap];0.80[JPT][hapmap];0.91[ASN][1000 genomes]
rs2274741	0.95[CHB][hapmap]
rs2274743	0.92[ASN][1000 genomes]
rs2297143	0.91[ASN][1000 genomes]
rs2297145	0.91[CHB][hapmap];0.95[CHD][hapmap];0.81[ASN][1000 genomes]
rs2297147	0.81[AMR][1000 genomes];0.97[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2297151	0.92[ASN][1000 genomes]
rs2297152	0.91[ASN][1000 genomes]
rs2368217	0.91[CHB][hapmap];0.92[ASN][1000 genomes]
rs2780667	0.82[MKK][hapmap]
rs2887190	0.89[AFR][1000 genomes];0.94[AMR][1000 genomes];0.91[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs35805599	0.82[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs3737055	1.00[CEU][hapmap];1.00[CHB][hapmap];0.91[CHD][hapmap];1.00[GIH][hapmap];0.94[JPT][hapmap];0.83[MEX][hapmap];0.98[TSI][hapmap];0.88[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs3758403	0.84[AFR][1000 genomes];0.87[AMR][1000 genomes];0.88[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs3780920	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3780921	0.91[CHB][hapmap];0.80[JPT][hapmap];0.92[ASN][1000 genomes]
rs3780922	0.91[CHB][hapmap];1.00[CHD][hapmap];0.92[ASN][1000 genomes]
rs3780926	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.87[MEX][hapmap];1.00[TSI][hapmap];0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3824593	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3904244	0.95[CHB][hapmap]
rs3932559	0.91[CHB][hapmap];0.92[ASN][1000 genomes]
rs4018760	0.80[AMR][1000 genomes];0.97[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs4142123	0.85[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4481929	0.84[ASN][1000 genomes]
rs4747585	0.88[ASN][1000 genomes]
rs4747588	0.85[CHB][hapmap]
rs4749213	0.95[CHB][hapmap]
rs4749226	0.92[ASN][1000 genomes]
rs4749240	0.82[ASN][1000 genomes]
rs55741077	0.88[ASN][1000 genomes]
rs61849039	0.82[ASN][1000 genomes]
rs6482596	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6482600	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.84[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6482601	1.00[CHB][hapmap];1.00[CHD][hapmap];0.83[GIH][hapmap];1.00[JPT][hapmap];0.91[LWK][hapmap];0.94[MKK][hapmap];0.83[TSI][hapmap];0.93[YRI][hapmap];0.82[AFR][1000 genomes];0.97[ASN][1000 genomes]
rs67425403	0.92[ASN][1000 genomes]
rs7067696	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7068375	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.98[LWK][hapmap];0.96[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];0.96[YRI][hapmap];0.89[AFR][1000 genomes];0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7069942	0.95[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7070117	0.97[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7073381	0.82[ASN][1000 genomes]
rs7079282	0.88[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs7079792	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[YRI][hapmap];0.86[AFR][1000 genomes];0.94[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7079885	0.86[AFR][1000 genomes];0.94[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7083768	0.91[CHB][hapmap]
rs7086311	0.91[CHB][hapmap];0.95[CHD][hapmap];0.84[ASN][1000 genomes]
rs7086553	1.00[ASW][hapmap];0.96[CEU][hapmap];1.00[CHB][hapmap];0.98[CHD][hapmap];0.93[GIH][hapmap];0.96[LWK][hapmap];0.96[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];0.96[YRI][hapmap];0.84[AFR][1000 genomes];0.88[AMR][1000 genomes];0.90[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7087082	0.95[CHB][hapmap];0.88[CHD][hapmap];0.87[GIH][hapmap];0.94[JPT][hapmap]
rs7088171	0.95[CHB][hapmap]
rs7091128	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];0.91[LWK][hapmap];0.96[MEX][hapmap];0.94[MKK][hapmap];1.00[TSI][hapmap];0.93[YRI][hapmap];0.86[AFR][1000 genomes];0.94[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7091723	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.93[YRI][hapmap];0.86[AFR][1000 genomes];0.94[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7097009	0.80[CEU][hapmap];1.00[CHB][hapmap];0.88[CHD][hapmap];0.89[GIH][hapmap];0.94[JPT][hapmap]
rs7477806	0.85[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7894187	0.86[AMR][1000 genomes];0.85[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7896012	0.92[ASN][1000 genomes]
rs7897241	0.84[AMR][1000 genomes];0.95[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7901653	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.98[GIH][hapmap];1.00[JPT][hapmap];0.83[MEX][hapmap];1.00[TSI][hapmap];0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7901976	0.85[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7909135	0.84[CEU][hapmap]
rs7909684	0.80[AMR][1000 genomes];0.95[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7910367	0.82[AFR][1000 genomes];0.87[AMR][1000 genomes];0.90[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7910430	0.88[CEU][hapmap];1.00[CHB][hapmap];0.89[JPT][hapmap];0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7910688	0.91[CHB][hapmap];1.00[CHD][hapmap];0.80[JPT][hapmap];0.92[ASN][1000 genomes]
rs7914630	0.90[CHB][hapmap];0.92[ASN][1000 genomes]
rs7918395	0.85[AFR][1000 genomes];0.92[AMR][1000 genomes];0.89[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7919523	0.80[JPT][hapmap];0.83[ASN][1000 genomes]
rs7919621	1.00[CHB][hapmap];0.88[CHD][hapmap];0.80[GIH][hapmap];0.94[JPT][hapmap]
rs7921980	0.92[ASN][1000 genomes]
rs7922972	0.83[CEU][hapmap]
rs7924231	0.90[AMR][1000 genomes];0.91[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs882474	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];0.98[CHD][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];0.98[LWK][hapmap];0.96[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];0.96[YRI][hapmap];0.89[AFR][1000 genomes];0.90[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs882475	0.84[CEU][hapmap];0.81[TSI][hapmap]
rs9299837	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[YRI][hapmap];0.84[AFR][1000 genomes];0.94[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9651378	0.91[CHB][hapmap]
rs9971193	0.92[ASN][1000 genomes]
rs9971335	0.85[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2422253	chr10:27431366-27575370	Strong transcription Genic enhancers Active TSS Weak transcription Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	32 gene(s)	inside rSNPs	diseases

mRNA abundance (count:18)

SNP	Gene	Cis/trans	Tissue	Source
rs7900024	MASTL	cis	Esophagus Muscularis	GTEx
rs7900024	MASTL	cis	Nerve Tibial	GTEx
rs7900024	MASTL	cis	Muscle Skeletal	GTEx
rs7900024	MASTL	cis	Stomach	GTEx
rs7900024	RAB18	cis	parietal	SCAN
rs7900024	MASTL	cis	lung	GTEx
rs7900024	MASTL	cis	lymphoblastoid	seeQTL
rs7900024	MASTL	cis	Artery Aorta	GTEx
rs7900024	MASTL	cis	Thyroid	GTEx
rs7900024	MASTL	cis	Artery Tibial	GTEx
rs7900024	MASTL	cis	Adipose Subcutaneous	GTEx
rs7900024	MASTL	cis	Whole Blood	GTEx
rs7900024	LOC387646	cis	cerebellum	SCAN
rs7900024	MASTL	cis	cerebellum	SCAN
rs7900024	YME1L1	Cis_1M	lymphoblastoid	RTeQTL
rs7900024	MASTL	cis	Skin Sun Exposed Lower leg	GTEx
rs7900024	ANKRD26	cis	parietal	SCAN
rs7900024	ACBD5	cis	cerebellum	SCAN

Chromatin state (count:127 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:27441200-27445800	Active TSS	IMR90 fetal lung fibroblasts Cell Line	lung
2	chr10:27441200-27446200	Active TSS	ES-I3 Cell Line	embryonic stem cell
3	chr10:27441200-27446200	Active TSS	iPS-15b Cell Line	embryonic stem cell
4	chr10:27441200-27446200	Active TSS	Foreskin Melanocyte Primary Cells skin01	Skin
5	chr10:27441200-27446400	Active TSS	H1 Cell Line	embryonic stem cell
6	chr10:27441200-27446400	Active TSS	HUES6 Cell Line	embryonic stem cell
7	chr10:27441200-27446400	Active TSS	Foreskin Fibroblast Primary Cells skin02	Skin
8	chr10:27441600-27445400	Active TSS	Aorta	Aorta
9	chr10:27441600-27445600	Active TSS	Right Atrium	heart
10	chr10:27441600-27446200	Active TSS	H9 Cell Line	embryonic stem cell
11	chr10:27441800-27445400	Active TSS	HSMMtube	muscle
12	chr10:27441800-27445600	Active TSS	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
13	chr10:27441800-27446000	Active TSS	HUES64 Cell Line	embryonic stem cell
14	chr10:27441800-27446200	Active TSS	iPS-20b Cell Line	embryonic stem cell
15	chr10:27442000-27445000	Transcr. at gene 5' and 3'	Primary T helper 17 cells PMA-I stimulated	--
16	chr10:27442000-27445200	Active TSS	Lung	lung
17	chr10:27442000-27445400	Active TSS	ES-WA7 Cell Line	embryonic stem cell
18	chr10:27442000-27445400	Active TSS	Left Ventricle	heart
19	chr10:27442000-27445400	Active TSS	Right Ventricle	heart
20	chr10:27442000-27445400	Active TSS	NHEK	skin
21	chr10:27442000-27445600	Active TSS	Colonic Mucosa	Colon
22	chr10:27442000-27445600	Active TSS	HSMM	muscle
23	chr10:27442000-27445600	Active TSS	NHLF	lung
24	chr10:27442000-27445800	Active TSS	iPS DF 19.11 Cell Line	embryonic stem cell
25	chr10:27442000-27445800	Active TSS	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
26	chr10:27442000-27445800	Active TSS	A549	lung
27	chr10:27442000-27446000	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
28	chr10:27442000-27446000	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
29	chr10:27442000-27446000	Active TSS	Muscle Satellite Cultured Cells	--
30	chr10:27442000-27446000	Active TSS	NHDF-Ad	bronchial
31	chr10:27442000-27446200	Active TSS	HUES48 Cell Line	embryonic stem cell
32	chr10:27442000-27446200	Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
33	chr10:27442000-27446200	Active TSS	GM12878-XiMat	blood
34	chr10:27442000-27446200	Active TSS	Hela-S3	cervix
35	chr10:27442200-27445200	Active TSS	Fetal Brain Male	brain
36	chr10:27442200-27445200	Active TSS	Ovary	ovary
37	chr10:27442200-27445400	Active TSS	Primary T killer naive cells fromperipheralblood	blood
38	chr10:27442200-27445400	Active TSS	Fetal Intestine Large	intestine
39	chr10:27442200-27445400	Active TSS	Pancreatic Islets	Pancreatic Islet
40	chr10:27442200-27445400	Active TSS	Fetal Lung	lung
41	chr10:27442200-27445400	Active TSS	Placenta Amnion	Placenta Amnion
42	chr10:27442200-27445600	Active TSS	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
43	chr10:27442200-27445600	Active TSS	iPS DF 6.9 Cell Line	embryonic stem cell
44	chr10:27442200-27445600	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
45	chr10:27442200-27445600	Active TSS	ES-UCSF4 Cell Line	embryonic stem cell
46	chr10:27442200-27445600	Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
47	chr10:27442200-27445600	Active TSS	Breast Myoepithelial Primary Cells	Breast
48	chr10:27442200-27445600	Active TSS	Fetal Intestine Small	intestine
49	chr10:27442200-27445600	Active TSS	Fetal Kidney	kidney
50	chr10:27442200-27445600	Active TSS	Rectal Mucosa Donor 29	rectum

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