The 2.0 version of rSNPBase

Variant report

Variant rs10899131
Chromosome Location chr11:75529585-75529586
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:100 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:75525600-75529800 Active TSS GM12878-XiMat blood
2 chr11:75528000-75531400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
3 chr11:75528000-75537800 Weak transcription Aorta Aorta
4 chr11:75528000-75538400 Weak transcription Fetal Muscle Trunk muscle
5 chr11:75528200-75529600 Weak transcription Spleen Spleen
6 chr11:75528200-75530400 Enhancers Primary T helper memory cells from peripheral blood 1 blood
7 chr11:75528200-75531800 Weak transcription Gastric stomach
8 chr11:75528200-75531800 Weak transcription Ovary ovary
9 chr11:75528200-75541000 Weak transcription Esophagus oesophagus
10 chr11:75528200-75549000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
11 chr11:75528200-75553000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
12 chr11:75528400-75530600 Enhancers Primary monocytes fromperipheralblood blood
13 chr11:75528400-75530600 Enhancers Primary T helper cells PMA-I stimulated --
14 chr11:75528400-75530600 Enhancers HepG2 liver
15 chr11:75528400-75530800 Enhancers Placenta Placenta
16 chr11:75528400-75531200 Weak transcription Sigmoid Colon Sigmoid Colon
17 chr11:75528400-75531400 Weak transcription Stomach Mucosa stomach
18 chr11:75528400-75531600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
19 chr11:75528400-75531800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
20 chr11:75528400-75531800 Weak transcription Left Ventricle heart
21 chr11:75528400-75533400 Weak transcription Primary T helper naive cells fromperipheralblood blood
22 chr11:75528400-75533400 Weak transcription Fetal Stomach stomach
23 chr11:75528400-75533800 Weak transcription Lung lung
24 chr11:75528400-75537400 Weak transcription HSMMtube muscle
25 chr11:75528400-75541600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
26 chr11:75528400-75543000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
27 chr11:75528400-75550800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
28 chr11:75528400-75561600 Weak transcription HSMM muscle
29 chr11:75528400-75561800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
30 chr11:75528600-75529800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
31 chr11:75528600-75530000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
32 chr11:75528600-75530600 Enhancers Hela-S3 cervix
33 chr11:75528600-75530600 Enhancers Monocytes-CD14+_RO01746 blood
34 chr11:75528600-75531600 Weak transcription Muscle Satellite Cultured Cells --
35 chr11:75528600-75531600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
36 chr11:75528600-75531800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
37 chr11:75528600-75531800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
38 chr11:75528600-75531800 Weak transcription Right Atrium heart
39 chr11:75528600-75531800 Weak transcription NHEK skin
40 chr11:75528600-75532000 Weak transcription Duodenum Smooth Muscle Duodenum
41 chr11:75528600-75532400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
42 chr11:75528600-75532600 Weak transcription Primary hematopoietic stem cells short term culture blood
43 chr11:75528600-75533000 Weak transcription K562 blood
44 chr11:75528600-75533400 Weak transcription Rectal Mucosa Donor 31 rectum
45 chr11:75528600-75533800 Weak transcription Colonic Mucosa Colon
46 chr11:75528600-75534000 Weak transcription Primary T helper naive cells from peripheral blood blood
47 chr11:75528600-75534000 Weak transcription Fetal Intestine Small intestine
48 chr11:75528600-75534000 Weak transcription Rectal Mucosa Donor 29 rectum
49 chr11:75528600-75534200 Weak transcription Primary T cells from cord blood blood
50 chr11:75528600-75534200 Weak transcription Fetal Intestine Large intestine

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Last update: Aug 31, 2015