The 2.0 version of rSNPBase

Variant report

Variant rs12224062
Chromosome Location chr11:75546426-75546427
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:74 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:75528200-75549000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr11:75528200-75553000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr11:75528400-75550800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
4 chr11:75528400-75561600 Weak transcription HSMM muscle
5 chr11:75528400-75561800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
6 chr11:75528600-75561400 Weak transcription Fetal Brain Female brain
7 chr11:75528600-75561400 Weak transcription Thymus Thymus
8 chr11:75528600-75563600 Weak transcription Dnd41 blood
9 chr11:75528800-75547200 Weak transcription Primary neutrophils fromperipheralblood blood
10 chr11:75532200-75551000 Weak transcription NHEK skin
11 chr11:75532400-75551000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
12 chr11:75533600-75549000 Weak transcription K562 blood
13 chr11:75534800-75549800 Weak transcription Primary T helper naive cells fromperipheralblood blood
14 chr11:75535000-75547200 Weak transcription Primary hematopoietic stem cells blood
15 chr11:75535400-75550000 Weak transcription Primary T helper naive cells from peripheral blood blood
16 chr11:75535400-75560800 Weak transcription Primary T helper cells PMA-I stimulated --
17 chr11:75535400-75579000 Weak transcription Fetal Intestine Large intestine
18 chr11:75535600-75550800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
19 chr11:75535600-75556200 Weak transcription A549 lung
20 chr11:75535800-75573800 Weak transcription Primary T regulatory cells fromperipheralblood blood
21 chr11:75537000-75547000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
22 chr11:75537000-75548800 Weak transcription Fetal Stomach stomach
23 chr11:75537600-75549000 Weak transcription Fetal Muscle Leg muscle
24 chr11:75538000-75551400 Weak transcription Cortex derived primary cultured neurospheres brain
25 chr11:75538000-75563000 Weak transcription HepG2 liver
26 chr11:75538200-75548800 Weak transcription Fetal Intestine Small intestine
27 chr11:75538200-75551400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
28 chr11:75538400-75546800 Weak transcription Primary T helper cells fromperipheralblood blood
29 chr11:75538600-75567600 Weak transcription Placenta Placenta
30 chr11:75538800-75551000 Weak transcription Skeletal Muscle Female skeletal muscle
31 chr11:75538800-75591400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
32 chr11:75539200-75547200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
33 chr11:75539200-75547600 Weak transcription Duodenum Mucosa Duodenum
34 chr11:75539200-75551000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
35 chr11:75539600-75549600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
36 chr11:75539600-75550800 Weak transcription Skeletal Muscle Male skeletal muscle
37 chr11:75540200-75561000 Weak transcription Lung lung
38 chr11:75540400-75547400 Weak transcription Breast Myoepithelial Primary Cells Breast
39 chr11:75540600-75551000 Weak transcription HUES64 Cell Line embryonic stem cell
40 chr11:75540800-75547200 Weak transcription Duodenum Smooth Muscle Duodenum
41 chr11:75540800-75550800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
42 chr11:75541800-75548800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
43 chr11:75542200-75546800 Weak transcription Primary monocytes fromperipheralblood blood
44 chr11:75542200-75548600 Weak transcription HUVEC blood vessel
45 chr11:75542200-75549400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
46 chr11:75542800-75561800 Weak transcription Fetal Thymus thymus
47 chr11:75543000-75547200 Weak transcription Primary hematopoietic stem cells short term culture blood
48 chr11:75543200-75547400 Weak transcription Primary T cells from cord blood blood
49 chr11:75543600-75550400 Weak transcription Rectal Smooth Muscle rectum
50 chr11:75543600-75551400 Weak transcription Colon Smooth Muscle Colon

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Last update: Aug 31, 2015