The 2.0 version of rSNPBase

Variant report

Variant rs11236539
Chromosome Location chr11:75532572-75532573
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:98 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:75528000-75537800 Weak transcription Aorta Aorta
2 chr11:75528000-75538400 Weak transcription Fetal Muscle Trunk muscle
3 chr11:75528200-75541000 Weak transcription Esophagus oesophagus
4 chr11:75528200-75549000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
5 chr11:75528200-75553000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
6 chr11:75528400-75533400 Weak transcription Primary T helper naive cells fromperipheralblood blood
7 chr11:75528400-75533400 Weak transcription Fetal Stomach stomach
8 chr11:75528400-75533800 Weak transcription Lung lung
9 chr11:75528400-75537400 Weak transcription HSMMtube muscle
10 chr11:75528400-75541600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
11 chr11:75528400-75543000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
12 chr11:75528400-75550800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
13 chr11:75528400-75561600 Weak transcription HSMM muscle
14 chr11:75528400-75561800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
15 chr11:75528600-75532600 Weak transcription Primary hematopoietic stem cells short term culture blood
16 chr11:75528600-75533000 Weak transcription K562 blood
17 chr11:75528600-75533400 Weak transcription Rectal Mucosa Donor 31 rectum
18 chr11:75528600-75533800 Weak transcription Colonic Mucosa Colon
19 chr11:75528600-75534000 Weak transcription Primary T helper naive cells from peripheral blood blood
20 chr11:75528600-75534000 Weak transcription Fetal Intestine Small intestine
21 chr11:75528600-75534000 Weak transcription Rectal Mucosa Donor 29 rectum
22 chr11:75528600-75534200 Weak transcription Primary T cells from cord blood blood
23 chr11:75528600-75534200 Weak transcription Fetal Intestine Large intestine
24 chr11:75528600-75534600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
25 chr11:75528600-75534600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
26 chr11:75528600-75534600 Weak transcription Liver Liver
27 chr11:75528600-75535200 Weak transcription NHDF-Ad bronchial
28 chr11:75528600-75536200 Weak transcription Brain Cingulate Gyrus brain
29 chr11:75528600-75536600 Weak transcription Osteobl bone
30 chr11:75528600-75537400 Weak transcription Cortex derived primary cultured neurospheres brain
31 chr11:75528600-75537400 Weak transcription Skeletal Muscle Female skeletal muscle
32 chr11:75528600-75537400 Weak transcription NHLF lung
33 chr11:75528600-75537600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
34 chr11:75528600-75537600 Weak transcription Brain Angular Gyrus brain
35 chr11:75528600-75537600 Weak transcription Brain Substantia Nigra brain
36 chr11:75528600-75537600 Weak transcription Fetal Kidney kidney
37 chr11:75528600-75537800 Weak transcription Brain Anterior Caudate brain
38 chr11:75528600-75538000 Weak transcription Breast Myoepithelial Primary Cells Breast
39 chr11:75528600-75538000 Weak transcription Psoas Muscle Psoas
40 chr11:75528600-75540000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
41 chr11:75528600-75543800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
42 chr11:75528600-75561400 Weak transcription Fetal Brain Female brain
43 chr11:75528600-75561400 Weak transcription Thymus Thymus
44 chr11:75528600-75563600 Weak transcription Dnd41 blood
45 chr11:75528800-75533800 Weak transcription Brain Hippocampus Middle brain
46 chr11:75528800-75534400 Weak transcription Primary T killer memory cells from peripheral blood blood
47 chr11:75528800-75534600 Weak transcription Primary T killer naive cells fromperipheralblood blood
48 chr11:75528800-75534800 Weak transcription Pancreatic Islets Pancreatic Islet
49 chr11:75528800-75535200 Enhancers Fetal Adrenal Gland Adrenal Gland
50 chr11:75528800-75547200 Weak transcription Primary neutrophils fromperipheralblood blood

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Last update: Aug 31, 2015