The 2.0 version of rSNPBase

Variant report

Variant rs11236543
Chromosome Location chr11:75538596-75538597
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:93 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:75528200-75541000 Weak transcription Esophagus oesophagus
2 chr11:75528200-75549000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
3 chr11:75528200-75553000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
4 chr11:75528400-75541600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
5 chr11:75528400-75543000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
6 chr11:75528400-75550800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
7 chr11:75528400-75561600 Weak transcription HSMM muscle
8 chr11:75528400-75561800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
9 chr11:75528600-75540000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
10 chr11:75528600-75543800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
11 chr11:75528600-75561400 Weak transcription Fetal Brain Female brain
12 chr11:75528600-75561400 Weak transcription Thymus Thymus
13 chr11:75528600-75563600 Weak transcription Dnd41 blood
14 chr11:75528800-75547200 Weak transcription Primary neutrophils fromperipheralblood blood
15 chr11:75529200-75544400 Weak transcription Primary T cells fromperipheralblood blood
16 chr11:75529200-75544400 Weak transcription Fetal Brain Male brain
17 chr11:75531800-75539400 Enhancers Primary monocytes fromperipheralblood blood
18 chr11:75532200-75538600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
19 chr11:75532200-75551000 Weak transcription NHEK skin
20 chr11:75532400-75551000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
21 chr11:75533200-75539400 Enhancers Rectal Smooth Muscle rectum
22 chr11:75533600-75540600 Weak transcription Ovary ovary
23 chr11:75533600-75549000 Weak transcription K562 blood
24 chr11:75534000-75538600 Weak transcription Colonic Mucosa Colon
25 chr11:75534200-75539200 Enhancers Colon Smooth Muscle Colon
26 chr11:75534800-75542600 Weak transcription Fetal Thymus thymus
27 chr11:75534800-75544400 Weak transcription Sigmoid Colon Sigmoid Colon
28 chr11:75534800-75549800 Weak transcription Primary T helper naive cells fromperipheralblood blood
29 chr11:75535000-75547200 Weak transcription Primary hematopoietic stem cells blood
30 chr11:75535200-75543600 Weak transcription Small Intestine intestine
31 chr11:75535400-75539600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
32 chr11:75535400-75540400 Weak transcription Primary T killer memory cells from peripheral blood blood
33 chr11:75535400-75545400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
34 chr11:75535400-75550000 Weak transcription Primary T helper naive cells from peripheral blood blood
35 chr11:75535400-75560800 Weak transcription Primary T helper cells PMA-I stimulated --
36 chr11:75535400-75579000 Weak transcription Fetal Intestine Large intestine
37 chr11:75535600-75550800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
38 chr11:75535600-75556200 Weak transcription A549 lung
39 chr11:75535800-75541600 Weak transcription Primary T cells from cord blood blood
40 chr11:75535800-75573800 Weak transcription Primary T regulatory cells fromperipheralblood blood
41 chr11:75536600-75543200 Weak transcription Right Ventricle heart
42 chr11:75536800-75540400 Enhancers Primary B cells from cord blood blood
43 chr11:75536800-75542600 Weak transcription Hela-S3 cervix
44 chr11:75536800-75543200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
45 chr11:75536800-75543200 Weak transcription Brain Cingulate Gyrus brain
46 chr11:75537000-75539800 Weak transcription Lung lung
47 chr11:75537000-75543200 Weak transcription Spleen Spleen
48 chr11:75537000-75547000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
49 chr11:75537000-75548800 Weak transcription Fetal Stomach stomach
50 chr11:75537200-75540600 Enhancers Primary B cells from peripheral blood blood

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Last update: Aug 31, 2015