Variant report

Variant	rs7108178
Chromosome Location	chr11:75544298-75544299
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:75542965..75545521-chr11:75546194..75548831,2	K562	blood:
2	chr11:75542621..75546363-chr11:75550755..75554633,4	MCF-7	breast:

Variant related genes	Relation type
ENSG00000199362	Chromatin interaction
ENSG00000200256	Chromatin interaction

Extended variants
information (count: 119 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:115)

rs_ID	r²[population]
rs10160802	0.90[CEU][hapmap];0.84[MEX][hapmap]
rs1017713	1.00[CEU][hapmap];0.93[CHB][hapmap];0.89[CHD][hapmap];0.94[JPT][hapmap];0.90[TSI][hapmap];0.91[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10219339	1.00[CEU][hapmap];0.93[CHB][hapmap];0.89[CHD][hapmap];0.94[JPT][hapmap];0.92[MEX][hapmap];0.90[TSI][hapmap];0.86[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10793124	0.81[CEU][hapmap];0.86[CHB][hapmap];0.81[JPT][hapmap];0.81[ASN][1000 genomes]
rs10793125	0.81[CEU][hapmap];0.86[CHB][hapmap];0.81[JPT][hapmap];0.81[ASN][1000 genomes]
rs10793126	0.81[ASN][1000 genomes]
rs10793127	0.87[ASN][1000 genomes]
rs10793132	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[YRI][hapmap];0.96[AFR][1000 genomes];0.88[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10793133	0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10793135	1.00[CEU][hapmap];0.85[CHB][hapmap];1.00[CHD][hapmap];0.94[JPT][hapmap];0.84[MEX][hapmap];1.00[TSI][hapmap];0.98[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs10899109	0.81[ASN][1000 genomes]
rs10899110	0.81[CEU][hapmap];0.86[CHB][hapmap];0.81[ASN][1000 genomes]
rs10899113	0.87[ASN][1000 genomes]
rs10899114	0.90[CEU][hapmap]
rs10899116	0.90[CEU][hapmap];0.93[CHB][hapmap];0.89[CHD][hapmap];0.81[JPT][hapmap];0.81[TSI][hapmap];0.88[ASN][1000 genomes]
rs10899118	1.00[CEU][hapmap];1.00[GIH][hapmap];0.87[LWK][hapmap];0.85[MEX][hapmap];0.81[TSI][hapmap];0.93[YRI][hapmap];0.81[AFR][1000 genomes];0.85[EUR][1000 genomes]
rs10899119	1.00[CEU][hapmap];0.93[CHB][hapmap];0.94[JPT][hapmap];0.86[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10899120	0.86[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10899121	1.00[CEU][hapmap];0.93[CHB][hapmap];0.89[CHD][hapmap];1.00[GIH][hapmap];0.94[JPT][hapmap];0.94[MKK][hapmap];0.90[TSI][hapmap];0.91[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs10899122	1.00[CEU][hapmap];0.93[CHB][hapmap];1.00[JPT][hapmap];0.87[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs10899123	1.00[CEU][hapmap];0.93[CHB][hapmap];0.94[JPT][hapmap];0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10899124	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10899127	1.00[CEU][hapmap];0.92[CHB][hapmap];0.93[JPT][hapmap];0.86[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10899128	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.86[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10899129	1.00[CEU][hapmap];1.00[CHB][hapmap];0.96[CHD][hapmap];0.94[JPT][hapmap];0.84[MEX][hapmap];1.00[TSI][hapmap];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10899131	0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10899132	0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10899133	0.96[ASN][1000 genomes]
rs10899134	1.00[CEU][hapmap];1.00[CHB][hapmap];0.96[CHD][hapmap];1.00[JPT][hapmap];0.84[MEX][hapmap];1.00[TSI][hapmap];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10899135	0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10899136	1.00[CEU][hapmap];1.00[CHB][hapmap];0.92[CHD][hapmap];1.00[JPT][hapmap];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10899137	0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10899138	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10899139	0.91[AFR][1000 genomes];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10899140	0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10899141	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.84[MEX][hapmap];1.00[TSI][hapmap];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10899142	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10899144	0.88[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10899145	0.84[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.94[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];0.87[MKK][hapmap];1.00[TSI][hapmap];0.90[YRI][hapmap];0.92[AFR][1000 genomes];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11236511	0.86[CHB][hapmap];0.81[JPT][hapmap]
rs11236514	0.81[CEU][hapmap];0.86[CHB][hapmap];0.81[JPT][hapmap];0.81[ASN][1000 genomes]
rs11236515	0.81[CEU][hapmap];0.86[CHB][hapmap];0.81[JPT][hapmap];0.81[ASN][1000 genomes]
rs11236516	0.81[CEU][hapmap];0.86[CHB][hapmap];0.81[JPT][hapmap];0.81[ASN][1000 genomes]
rs11236517	0.86[CHB][hapmap]
rs11236518	0.81[CEU][hapmap];0.86[CHB][hapmap];0.81[JPT][hapmap];0.81[ASN][1000 genomes]
rs11236519	0.87[ASN][1000 genomes]
rs11236527	0.87[ASN][1000 genomes]
rs11236528	0.87[ASN][1000 genomes]
rs11236530	1.00[CEU][hapmap];0.93[CHB][hapmap];0.94[JPT][hapmap];0.86[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11236531	1.00[CEU][hapmap];0.93[CHB][hapmap];0.85[CHD][hapmap];1.00[GIH][hapmap];0.94[JPT][hapmap];0.92[MEX][hapmap];0.92[MKK][hapmap];0.90[TSI][hapmap];0.91[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11236533	1.00[CEU][hapmap];0.85[CHB][hapmap];0.89[CHD][hapmap];0.94[JPT][hapmap];0.84[MEX][hapmap];1.00[TSI][hapmap];0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11236534	1.00[CEU][hapmap];0.93[CHB][hapmap];0.94[JPT][hapmap];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11236537	0.96[AFR][1000 genomes];0.88[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs11236538	0.91[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11236539	0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11236540	0.94[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];0.96[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.89[LWK][hapmap];1.00[MEX][hapmap];0.98[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];0.84[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11236542	0.93[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11236543	0.93[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11236545	1.00[CEU][hapmap];0.92[CHB][hapmap];1.00[JPT][hapmap];0.93[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11236546	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11236549	1.00[CEU][hapmap];0.92[CHB][hapmap];0.92[JPT][hapmap];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11236551	0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11236552	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.84[MEX][hapmap];1.00[TSI][hapmap];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11236553	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.84[MEX][hapmap];1.00[TSI][hapmap];0.82[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11236554	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11236555	1.00[CEU][hapmap];0.93[CHB][hapmap];1.00[JPT][hapmap];0.86[YRI][hapmap];0.92[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11236564	0.95[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11236565	0.80[EUR][1000 genomes]
rs11501918	0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11821808	0.81[ASN][1000 genomes]
rs11822903	0.88[CEU][hapmap];1.00[CHB][hapmap];0.95[YRI][hapmap];0.96[AFR][1000 genomes];0.88[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs11823869	1.00[CEU][hapmap];0.93[CHB][hapmap];0.93[JPT][hapmap];0.86[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs12222542	1.00[CEU][hapmap];0.93[CHB][hapmap];0.94[JPT][hapmap];0.93[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs12222995	1.00[CEU][hapmap];0.93[CHB][hapmap];0.85[CHD][hapmap];0.94[JPT][hapmap];0.90[TSI][hapmap];0.93[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs12223234	0.86[AMR][1000 genomes];0.95[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs12224062	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12278224	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12278257	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.84[MEX][hapmap];1.00[TSI][hapmap];0.86[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12280456	0.90[CEU][hapmap];0.85[CHB][hapmap];0.94[JPT][hapmap];0.84[AMR][1000 genomes];0.82[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs12280464	0.90[CEU][hapmap];0.85[CHB][hapmap];0.93[CHD][hapmap];0.94[JPT][hapmap];0.80[AMR][1000 genomes];0.83[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs12285853	0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1458836	1.00[CEU][hapmap];1.00[CHB][hapmap];0.96[CHD][hapmap];0.94[JPT][hapmap];0.84[MEX][hapmap];1.00[TSI][hapmap];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs17134394	1.00[CEU][hapmap];0.93[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.80[YRI][hapmap];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2004638	0.90[CEU][hapmap]
rs2008476	0.90[CEU][hapmap];0.93[CHB][hapmap];0.81[JPT][hapmap];0.84[MEX][hapmap];0.87[ASN][1000 genomes]
rs2168947	1.00[CEU][hapmap];1.00[GIH][hapmap];0.87[LWK][hapmap];0.92[MEX][hapmap];0.81[TSI][hapmap];0.93[YRI][hapmap];0.84[AFR][1000 genomes];0.88[EUR][1000 genomes]
rs3060	0.94[ASW][hapmap];1.00[CEU][hapmap];1.00[GIH][hapmap];0.94[LWK][hapmap];0.92[MEX][hapmap];0.91[MKK][hapmap];0.90[TSI][hapmap];0.96[YRI][hapmap];0.94[AFR][1000 genomes];0.93[EUR][1000 genomes]
rs3740849	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];0.96[CHD][hapmap];1.00[GIH][hapmap];0.94[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];0.96[YRI][hapmap];0.96[AFR][1000 genomes];0.88[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs3740850	1.00[CEU][hapmap];1.00[CHB][hapmap];0.96[CHD][hapmap];0.94[JPT][hapmap];0.84[MEX][hapmap];1.00[TSI][hapmap];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs58340821	0.82[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs58411334	0.87[ASN][1000 genomes]
rs60677263	0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs60692776	0.86[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6592615	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.83[YRI][hapmap];0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs66784596	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs67233017	0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs67268976	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7101806	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.84[MEX][hapmap];1.00[TSI][hapmap];0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7106736	0.98[AFR][1000 genomes];0.88[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7107742	0.84[ASW][hapmap];1.00[CEU][hapmap];0.93[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.98[LWK][hapmap];1.00[MEX][hapmap];0.87[MKK][hapmap];1.00[TSI][hapmap];0.90[YRI][hapmap];0.88[AFR][1000 genomes];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7110517	0.96[AFR][1000 genomes];0.88[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7118039	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.84[MEX][hapmap];1.00[TSI][hapmap];0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7118293	0.86[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7118569	0.93[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs7122123	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7126727	1.00[CEU][hapmap];0.86[CHB][hapmap];0.93[JPT][hapmap];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7128716	0.88[CEU][hapmap];0.84[CHB][hapmap];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs72997616	0.87[ASN][1000 genomes]
rs72997623	0.83[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs72997677	0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7933235	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7937642	0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7944950	0.91[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7947418	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.84[MEX][hapmap];1.00[TSI][hapmap];0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7947512	0.88[EUR][1000 genomes];0.93[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3381903	chr11:75123498-75587233	Bivalent Enhancer Strong transcription Enhancers Bivalent/Poised TSS Genic enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	81 gene(s)	inside rSNPs	diseases
2	nsv897924	chr11:75424546-75678647	Enhancers Weak transcription Flanking Bivalent TSS/Enh Flanking Active TSS Genic enhancers Active TSS Strong transcription Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	37 gene(s)	inside rSNPs	diseases
3	nsv897925	chr11:75456134-75556323	Active TSS Flanking Bivalent TSS/Enh Enhancers Weak transcription Bivalent/Poised TSS Flanking Active TSS Strong transcription Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	31 gene(s)	inside rSNPs	diseases
4	nsv832212	chr11:75524993-75725623	Weak transcription Genic enhancers Enhancers Active TSS Flanking Active TSS Strong transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	25 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:77 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:75528200-75549000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr11:75528200-75553000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
3	chr11:75528400-75550800	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
4	chr11:75528400-75561600	Weak transcription	HSMM	muscle
5	chr11:75528400-75561800	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
6	chr11:75528600-75561400	Weak transcription	Fetal Brain Female	brain
7	chr11:75528600-75561400	Weak transcription	Thymus	Thymus
8	chr11:75528600-75563600	Weak transcription	Dnd41	blood
9	chr11:75528800-75547200	Weak transcription	Primary neutrophils fromperipheralblood	blood
10	chr11:75529200-75544400	Weak transcription	Primary T cells fromperipheralblood	blood
11	chr11:75529200-75544400	Weak transcription	Fetal Brain Male	brain
12	chr11:75532200-75551000	Weak transcription	NHEK	skin
13	chr11:75532400-75551000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
14	chr11:75533600-75549000	Weak transcription	K562	blood
15	chr11:75534800-75544400	Weak transcription	Sigmoid Colon	Sigmoid Colon
16	chr11:75534800-75549800	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
17	chr11:75535000-75547200	Weak transcription	Primary hematopoietic stem cells	blood
18	chr11:75535400-75545400	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
19	chr11:75535400-75550000	Weak transcription	Primary T helper naive cells from peripheral blood	blood
20	chr11:75535400-75560800	Weak transcription	Primary T helper cells PMA-I stimulated	--
21	chr11:75535400-75579000	Weak transcription	Fetal Intestine Large	intestine
22	chr11:75535600-75550800	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
23	chr11:75535600-75556200	Weak transcription	A549	lung
24	chr11:75535800-75573800	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
25	chr11:75537000-75547000	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
26	chr11:75537000-75548800	Weak transcription	Fetal Stomach	stomach
27	chr11:75537600-75549000	Weak transcription	Fetal Muscle Leg	muscle
28	chr11:75538000-75551400	Weak transcription	Cortex derived primary cultured neurospheres	brain
29	chr11:75538000-75563000	Weak transcription	HepG2	liver
30	chr11:75538200-75548800	Weak transcription	Fetal Intestine Small	intestine
31	chr11:75538200-75551400	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
32	chr11:75538400-75546800	Weak transcription	Primary T helper cells fromperipheralblood	blood
33	chr11:75538600-75567600	Weak transcription	Placenta	Placenta
34	chr11:75538800-75546400	Weak transcription	Fetal Muscle Trunk	muscle
35	chr11:75538800-75551000	Weak transcription	Skeletal Muscle Female	skeletal muscle
36	chr11:75538800-75591400	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
37	chr11:75539000-75544400	Enhancers	Fetal Adrenal Gland	Adrenal Gland
38	chr11:75539200-75547200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
39	chr11:75539200-75547600	Weak transcription	Duodenum Mucosa	Duodenum
40	chr11:75539200-75551000	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
41	chr11:75539600-75549600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
42	chr11:75539600-75550800	Weak transcription	Skeletal Muscle Male	skeletal muscle
43	chr11:75540200-75561000	Weak transcription	Lung	lung
44	chr11:75540400-75547400	Weak transcription	Breast Myoepithelial Primary Cells	Breast
45	chr11:75540600-75551000	Weak transcription	HUES64 Cell Line	embryonic stem cell
46	chr11:75540800-75547200	Weak transcription	Duodenum Smooth Muscle	Duodenum
47	chr11:75540800-75550800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
48	chr11:75541800-75548800	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
49	chr11:75542200-75546800	Weak transcription	Primary monocytes fromperipheralblood	blood
50	chr11:75542200-75548600	Weak transcription	HUVEC	blood vessel

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links