The 2.0 version of rSNPBase

Variant report

Variant rs11236542
Chromosome Location chr11:75536454-75536455
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:97 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:75528000-75537800 Weak transcription Aorta Aorta
2 chr11:75528000-75538400 Weak transcription Fetal Muscle Trunk muscle
3 chr11:75528200-75541000 Weak transcription Esophagus oesophagus
4 chr11:75528200-75549000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
5 chr11:75528200-75553000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
6 chr11:75528400-75537400 Weak transcription HSMMtube muscle
7 chr11:75528400-75541600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
8 chr11:75528400-75543000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
9 chr11:75528400-75550800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
10 chr11:75528400-75561600 Weak transcription HSMM muscle
11 chr11:75528400-75561800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
12 chr11:75528600-75536600 Weak transcription Osteobl bone
13 chr11:75528600-75537400 Weak transcription Cortex derived primary cultured neurospheres brain
14 chr11:75528600-75537400 Weak transcription Skeletal Muscle Female skeletal muscle
15 chr11:75528600-75537400 Weak transcription NHLF lung
16 chr11:75528600-75537600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
17 chr11:75528600-75537600 Weak transcription Brain Angular Gyrus brain
18 chr11:75528600-75537600 Weak transcription Brain Substantia Nigra brain
19 chr11:75528600-75537600 Weak transcription Fetal Kidney kidney
20 chr11:75528600-75537800 Weak transcription Brain Anterior Caudate brain
21 chr11:75528600-75538000 Weak transcription Breast Myoepithelial Primary Cells Breast
22 chr11:75528600-75538000 Weak transcription Psoas Muscle Psoas
23 chr11:75528600-75540000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
24 chr11:75528600-75543800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
25 chr11:75528600-75561400 Weak transcription Fetal Brain Female brain
26 chr11:75528600-75561400 Weak transcription Thymus Thymus
27 chr11:75528600-75563600 Weak transcription Dnd41 blood
28 chr11:75528800-75547200 Weak transcription Primary neutrophils fromperipheralblood blood
29 chr11:75529000-75537400 Weak transcription Skeletal Muscle Male skeletal muscle
30 chr11:75529200-75537600 Weak transcription Brain Inferior Temporal Lobe brain
31 chr11:75529200-75544400 Weak transcription Primary T cells fromperipheralblood blood
32 chr11:75529200-75544400 Weak transcription Fetal Brain Male brain
33 chr11:75530400-75536600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
34 chr11:75531800-75539400 Enhancers Primary monocytes fromperipheralblood blood
35 chr11:75532000-75537400 Weak transcription Muscle Satellite Cultured Cells --
36 chr11:75532200-75538600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
37 chr11:75532200-75551000 Weak transcription NHEK skin
38 chr11:75532400-75536600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
39 chr11:75532400-75551000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
40 chr11:75533200-75539400 Enhancers Rectal Smooth Muscle rectum
41 chr11:75533400-75536600 Flanking Active TSS Monocytes-CD14+_RO01746 blood
42 chr11:75533600-75540600 Weak transcription Ovary ovary
43 chr11:75533600-75549000 Weak transcription K562 blood
44 chr11:75534000-75537400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
45 chr11:75534000-75537600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
46 chr11:75534000-75538600 Weak transcription Colonic Mucosa Colon
47 chr11:75534200-75536600 Weak transcription Brain Hippocampus Middle brain
48 chr11:75534200-75537800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
49 chr11:75534200-75539200 Enhancers Colon Smooth Muscle Colon
50 chr11:75534600-75537000 Enhancers Liver Liver

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Last update: Aug 31, 2015