The 2.0 version of rSNPBase

Variant report

Variant rs10912558
Chromosome Location chr1:173161700-173161701
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:39 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:173154400-173176200 Weak transcription Aorta Aorta
2 chr1:173154800-173164600 Weak transcription Primary B cells from cord blood blood
3 chr1:173157800-173162200 Genic enhancers HSMM muscle
4 chr1:173158800-173170200 Weak transcription Pancreatic Islets Pancreatic Islet
5 chr1:173160000-173164400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
6 chr1:173160200-173162200 Weak transcription Monocytes-CD14+_RO01746 blood
7 chr1:173160400-173162200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
8 chr1:173160400-173162400 Weak transcription Primary monocytes fromperipheralblood blood
9 chr1:173160400-173164400 Weak transcription Primary B cells from peripheral blood blood
10 chr1:173160400-173164600 Weak transcription Fetal Thymus thymus
11 chr1:173160400-173164800 Weak transcription Sigmoid Colon Sigmoid Colon
12 chr1:173160400-173166600 Weak transcription Rectal Smooth Muscle rectum
13 chr1:173160400-173174400 Weak transcription Spleen Spleen
14 chr1:173160600-173162000 Weak transcription Adipose Nuclei Adipose
15 chr1:173160600-173162400 Weak transcription Primary hematopoietic stem cells blood
16 chr1:173160600-173162400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
17 chr1:173160600-173162400 Genic enhancers HUVEC blood vessel
18 chr1:173160600-173163000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
19 chr1:173160600-173164800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
20 chr1:173160600-173171800 Weak transcription NHLF lung
21 chr1:173160600-173176000 Weak transcription Skeletal Muscle Female skeletal muscle
22 chr1:173160800-173162200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
23 chr1:173160800-173162200 Weak transcription NHDF-Ad bronchial
24 chr1:173160800-173162400 Weak transcription NH-A brain
25 chr1:173160800-173162400 Weak transcription Osteobl bone
26 chr1:173160800-173162600 Weak transcription Primary hematopoietic stem cells short term culture blood
27 chr1:173160800-173162800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
28 chr1:173160800-173163000 Weak transcription Colon Smooth Muscle Colon
29 chr1:173160800-173163000 Weak transcription NHEK skin
30 chr1:173160800-173163200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
31 chr1:173160800-173168000 Weak transcription HepG2 liver
32 chr1:173160800-173171200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
33 chr1:173161000-173162200 Weak transcription Muscle Satellite Cultured Cells --
34 chr1:173161000-173163000 Weak transcription HMEC breast
35 chr1:173161000-173164600 Weak transcription Dnd41 blood
36 chr1:173161200-173164600 Weak transcription Left Ventricle heart
37 chr1:173161400-173161800 Genic enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
38 chr1:173161400-173162000 Genic enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
39 chr1:173161400-173162400 Weak transcription HSMMtube muscle

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Last update: Aug 31, 2015