The 2.0 version of rSNPBase

Variant report

Variant rs10489268
Chromosome Location chr1:173162218-173162219
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:38 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:173154400-173176200 Weak transcription Aorta Aorta
2 chr1:173154800-173164600 Weak transcription Primary B cells from cord blood blood
3 chr1:173158800-173170200 Weak transcription Pancreatic Islets Pancreatic Islet
4 chr1:173160000-173164400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
5 chr1:173160400-173162400 Weak transcription Primary monocytes fromperipheralblood blood
6 chr1:173160400-173164400 Weak transcription Primary B cells from peripheral blood blood
7 chr1:173160400-173164600 Weak transcription Fetal Thymus thymus
8 chr1:173160400-173164800 Weak transcription Sigmoid Colon Sigmoid Colon
9 chr1:173160400-173166600 Weak transcription Rectal Smooth Muscle rectum
10 chr1:173160400-173174400 Weak transcription Spleen Spleen
11 chr1:173160600-173162400 Weak transcription Primary hematopoietic stem cells blood
12 chr1:173160600-173162400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
13 chr1:173160600-173162400 Genic enhancers HUVEC blood vessel
14 chr1:173160600-173163000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
15 chr1:173160600-173164800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
16 chr1:173160600-173171800 Weak transcription NHLF lung
17 chr1:173160600-173176000 Weak transcription Skeletal Muscle Female skeletal muscle
18 chr1:173160800-173162400 Weak transcription NH-A brain
19 chr1:173160800-173162400 Weak transcription Osteobl bone
20 chr1:173160800-173162600 Weak transcription Primary hematopoietic stem cells short term culture blood
21 chr1:173160800-173162800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
22 chr1:173160800-173163000 Weak transcription Colon Smooth Muscle Colon
23 chr1:173160800-173163000 Weak transcription NHEK skin
24 chr1:173160800-173163200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
25 chr1:173160800-173168000 Weak transcription HepG2 liver
26 chr1:173160800-173171200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
27 chr1:173161000-173163000 Weak transcription HMEC breast
28 chr1:173161000-173164600 Weak transcription Dnd41 blood
29 chr1:173161200-173164600 Weak transcription Left Ventricle heart
30 chr1:173161400-173162400 Weak transcription HSMMtube muscle
31 chr1:173161800-173164600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
32 chr1:173162000-173166400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
33 chr1:173162200-173163400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
34 chr1:173162200-173163400 Enhancers Monocytes-CD14+_RO01746 blood
35 chr1:173162200-173163800 Enhancers Muscle Satellite Cultured Cells --
36 chr1:173162200-173163800 Enhancers NHDF-Ad bronchial
37 chr1:173162200-173164200 Enhancers HSMM muscle
38 chr1:173162200-173165200 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015