Variant report

Variant	rs11587348
Chromosome Location	chr1:173138794-173138795
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 32 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:32)

rs_ID	r²[population]
rs10465507	1.00[ASN][1000 genomes]
rs10489266	1.00[ASN][1000 genomes]
rs10489268	0.82[AMR][1000 genomes];0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10798264	1.00[ASN][1000 genomes]
rs10912558	0.81[AMR][1000 genomes];0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10912561	1.00[ASN][1000 genomes]
rs11801818	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11806687	0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11807031	0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11808060	1.00[ASN][1000 genomes]
rs12120808	0.82[ASN][1000 genomes]
rs12125395	0.82[ASN][1000 genomes]
rs12138547	0.82[ASN][1000 genomes]
rs12141186	0.82[ASN][1000 genomes]
rs12144635	0.82[ASN][1000 genomes]
rs12144665	0.82[ASN][1000 genomes]
rs17300347	0.82[AMR][1000 genomes];0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17300677	0.82[ASN][1000 genomes]
rs17300754	0.82[ASN][1000 genomes]
rs17346501	0.82[AMR][1000 genomes];0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17372309	0.82[AMR][1000 genomes];0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4090392	0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4113832	0.82[AMR][1000 genomes];0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4916210	0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4916314	1.00[ASN][1000 genomes]
rs56074681	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs57928823	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61826345	0.82[AMR][1000 genomes];0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61828261	0.82[AMR][1000 genomes];0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61828267	0.82[ASN][1000 genomes]
rs72722845	0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72722865	0.82[ASN][1000 genomes]

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:173123000-173141200	Weak transcription	HSMMtube	muscle
2	chr1:173131400-173140800	Weak transcription	HSMM	muscle
3	chr1:173132200-173158800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast

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