Variant report

Variant	rs10947538
Chromosome Location	chr6:35126160-35126161
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr6:35111236..35113031-chr6:35124115..35126348,2	K562	blood:
2	chr6:35126065..35127862-chr6:35143837..35146241,2	K562	blood:
3	chr6:35124633..35127354-chr6:35127421..35129351,2	MCF-7	breast:

Extended variants
information (count: 28 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:28)

rs_ID	r²[population]
rs10484578	0.87[CHB][hapmap]
rs10807147	0.81[CHB][hapmap];0.84[JPT][hapmap];0.81[AMR][1000 genomes];0.85[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs10807148	0.81[AMR][1000 genomes];0.85[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12191117	0.93[AFR][1000 genomes];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12191184	0.96[AFR][1000 genomes];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12191808	0.81[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs12192566	0.81[AMR][1000 genomes];0.85[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12527639	0.81[AMR][1000 genomes];0.85[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12663320	0.92[ASN][1000 genomes]
rs1408256	0.87[CHB][hapmap];0.81[JPT][hapmap];0.81[AMR][1000 genomes];0.85[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1535814	0.87[CHB][hapmap];0.82[JPT][hapmap];0.81[AMR][1000 genomes];0.85[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs16872293	1.00[YRI][hapmap]
rs17539666	0.81[AMR][1000 genomes];0.85[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1886243	0.87[CHB][hapmap];0.81[JPT][hapmap];0.81[AMR][1000 genomes];0.84[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2038740	0.85[EUR][1000 genomes]
rs2181795	0.81[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs3800402	0.87[CHB][hapmap];0.82[JPT][hapmap];0.85[ASN][1000 genomes]
rs4711404	0.81[AFR][1000 genomes];0.89[EUR][1000 genomes]
rs4711406	1.00[CHB][hapmap];0.95[JPT][hapmap];0.81[AMR][1000 genomes];0.85[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs62404566	0.81[AMR][1000 genomes];0.84[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs62404583	0.81[AMR][1000 genomes];0.85[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6457804	0.82[CEU][hapmap];0.82[EUR][1000 genomes]
rs6915627	0.97[AMR][1000 genomes];0.90[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6923951	0.87[CHB][hapmap];0.81[JPT][hapmap];0.81[AMR][1000 genomes];0.84[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7764636	0.81[AFR][1000 genomes];0.89[EUR][1000 genomes]
rs9296143	0.81[AMR][1000 genomes];0.84[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs9348967	0.92[CEU][hapmap];0.91[YRI][hapmap];0.81[AFR][1000 genomes];0.88[EUR][1000 genomes]
rs9394274	0.85[EUR][1000 genomes]

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:35116800-35129200	Weak transcription	Aorta	Aorta
2	chr6:35118600-35132200	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
3	chr6:35123400-35126200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
4	chr6:35123400-35127600	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
5	chr6:35123800-35129000	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
6	chr6:35125800-35126200	Enhancers	Fetal Kidney	kidney
7	chr6:35126000-35126200	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived

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