The 2.0 version of rSNPBase

Variant report

Variant rs11130086
Chromosome Location chr3:46137970-46137971
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:38 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:46127200-46138200 Weak transcription Primary T cells from cord blood blood
2 chr3:46129200-46147400 Enhancers Primary monocytes fromperipheralblood blood
3 chr3:46129400-46154200 Enhancers Primary Natural Killer cells fromperipheralblood blood
4 chr3:46129800-46140000 Enhancers Fetal Thymus thymus
5 chr3:46130200-46141200 Enhancers Primary B cells from peripheral blood blood
6 chr3:46130600-46143000 Enhancers Primary hematopoietic stem cells short term culture blood
7 chr3:46131400-46138000 Weak transcription Skeletal Muscle Male skeletal muscle
8 chr3:46131400-46152200 Weak transcription Pancreas Pancrea
9 chr3:46132000-46139000 Weak transcription Rectal Mucosa Donor 31 rectum
10 chr3:46132000-46139000 Weak transcription Skeletal Muscle Female skeletal muscle
11 chr3:46132000-46140200 Enhancers Primary hematopoietic stem cells blood
12 chr3:46132200-46138000 Weak transcription NHDF-Ad bronchial
13 chr3:46132400-46138800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
14 chr3:46132400-46139000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
15 chr3:46132600-46138000 Weak transcription Adipose Nuclei Adipose
16 chr3:46134800-46138400 Weak transcription Primary T regulatory cells fromperipheralblood blood
17 chr3:46134800-46138800 Weak transcription Sigmoid Colon Sigmoid Colon
18 chr3:46136600-46138200 Weak transcription Duodenum Smooth Muscle Duodenum
19 chr3:46136800-46143200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
20 chr3:46137000-46139400 Enhancers GM12878-XiMat blood
21 chr3:46137000-46139600 Enhancers Primary B cells from cord blood blood
22 chr3:46137000-46139600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
23 chr3:46137200-46139800 Enhancers Rectal Mucosa Donor 29 rectum
24 chr3:46137400-46138200 Enhancers Colonic Mucosa Colon
25 chr3:46137400-46138800 Enhancers Dnd41 blood
26 chr3:46137400-46139400 Flanking Active TSS Monocytes-CD14+_RO01746 blood
27 chr3:46137400-46142600 Enhancers Primary T cells fromperipheralblood blood
28 chr3:46137600-46138000 Weak transcription Duodenum Mucosa Duodenum
29 chr3:46137600-46138000 Weak transcription Placenta Placenta
30 chr3:46137600-46139000 Bivalent Enhancer Thymus Thymus
31 chr3:46137600-46139200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
32 chr3:46137600-46139600 Enhancers Primary T helper cells PMA-I stimulated --
33 chr3:46137600-46140400 Enhancers Spleen Spleen
34 chr3:46137600-46141000 Enhancers Primary T helper cells fromperipheralblood blood
35 chr3:46137600-46141200 Enhancers Primary T killer memory cells from peripheral blood blood
36 chr3:46137800-46138000 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
37 chr3:46137800-46138000 Enhancers Small Intestine intestine
38 chr3:46137800-46138200 Enhancers Primary neutrophils fromperipheralblood blood

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Last update: Aug 31, 2015