Variant report

No data

(count:8 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr10:94576177..94578634-chr10:94580868..94583039,2	K562	blood:
2	chr10:94516220..94517755-chr10:94579937..94582278,2	K562	blood:
3	chr10:94571094..94575993-chr10:94578849..94584538,5	K562	blood:
4	chr10:94536151..94539223-chr10:94580087..94583002,3	K562	blood:
5	chr10:94580686..94582256-chr10:94587589..94589206,2	MCF-7	breast:
6	chr10:94351782..94353596-chr10:94580543..94583283,2	K562	blood:
7	chr10:94452898..94455134-chr10:94580607..94583172,2	K562	blood:
8	chr10:94579684..94583610-chr10:94606698..94609963,4	K562	blood:

No data

Variant related genes	Relation type
ENSG00000138160	Chromatin interaction
ENSG00000138190	Chromatin interaction

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs1033976	0.86[EUR][1000 genomes]
rs10786057	0.85[EUR][1000 genomes]
rs1326332	0.86[EUR][1000 genomes]
rs1409387	0.86[EUR][1000 genomes]
rs2246370	0.81[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs2246382	0.81[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs2246701	0.81[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs2250393	0.81[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs2422070	0.92[AFR][1000 genomes];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs2422072	0.80[EUR][1000 genomes]
rs2490732	0.81[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs2490733	0.81[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs2490740	0.84[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs2490742	0.87[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs2497322	0.85[EUR][1000 genomes]
rs2497323	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs2497324	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs2497326	0.91[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs2497327	0.91[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs2497331	0.81[EUR][1000 genomes]
rs2497339	0.81[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs2497348	0.83[EUR][1000 genomes]
rs4933749	0.81[EUR][1000 genomes]
rs7069070	0.98[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs973733	0.86[EUR][1000 genomes]

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:94574400-94581400	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
2	chr10:94575000-94581200	Weak transcription	K562	blood
3	chr10:94575200-94581400	Weak transcription	Adipose Nuclei	Adipose
4	chr10:94576200-94581400	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
5	chr10:94576200-94581600	Weak transcription	NHDF-Ad	bronchial
6	chr10:94576400-94581400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
7	chr10:94577000-94581400	Weak transcription	NHLF	lung
8	chr10:94579200-94581200	Weak transcription	A549	lung
9	chr10:94580000-94581200	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
10	chr10:94580400-94581400	Weak transcription	Monocytes-CD14+_RO01746	blood
11	chr10:94580400-94581600	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
12	chr10:94580800-94581800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
13	chr10:94580800-94582200	Enhancers	HUVEC	blood vessel

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