Variant report

Variant	rs2497324
Chromosome Location	chr10:94587109-94587110
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr10:94585721..94590083-chr10:94591817..94595632,6	K562	blood:
2	chr10:94459840..94462711-chr10:94586158..94587731,2	K562	blood:
3	chr10:94449207..94450831-chr10:94586920..94589534,2	K562	blood:
4	chr10:94459652..94461340-chr10:94585180..94587731,2	K562	blood:
5	chr10:94515128..94517989-chr10:94586362..94588868,2	K562	blood:

Variant related genes	Relation type
ENSG00000138190	Chromatin interaction
ENSG00000152804	Chromatin interaction

Extended variants
information (count: 53 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:53)

rs_ID	r²[population]
rs1033976	0.82[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10466167	1.00[ASN][1000 genomes]
rs10736071	1.00[ASN][1000 genomes]
rs10748586	0.96[CEU][hapmap];1.00[ASN][1000 genomes]
rs10786057	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11187183	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs1326331	1.00[ASN][1000 genomes]
rs1326332	0.95[CEU][hapmap];0.82[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1409387	1.00[CEU][hapmap];0.82[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2025730	0.96[CEU][hapmap];1.00[ASN][1000 genomes]
rs2094232	1.00[ASN][1000 genomes]
rs2148361	0.96[CEU][hapmap];1.00[ASN][1000 genomes]
rs2182451	0.96[CEU][hapmap];1.00[ASN][1000 genomes]
rs2246370	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2246382	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2246701	0.89[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2250393	1.00[CEU][hapmap];0.89[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2422070	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2422072	0.88[CEU][hapmap];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2488062	1.00[ASN][1000 genomes]
rs2490732	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2490733	1.00[CEU][hapmap];0.89[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2490740	1.00[CEU][hapmap];0.93[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2490742	1.00[CEU][hapmap];0.96[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2490744	1.00[ASN][1000 genomes]
rs2497322	1.00[CEU][hapmap];0.86[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2497323	1.00[CEU][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2497326	0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2497327	0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2497331	0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2497339	1.00[CEU][hapmap];0.89[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2497348	1.00[CEU][hapmap];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2497350	1.00[ASN][1000 genomes]
rs4517429	1.00[ASN][1000 genomes]
rs4933241	0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4933242	0.96[CEU][hapmap];1.00[ASN][1000 genomes]
rs4933749	0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4933752	1.00[ASN][1000 genomes]
rs6583846	1.00[CEU][hapmap];0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7069070	1.00[CEU][hapmap];0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7070025	0.88[CEU][hapmap];1.00[ASN][1000 genomes]
rs7078376	1.00[ASN][1000 genomes]
rs7082382	1.00[ASN][1000 genomes]
rs7089179	1.00[ASN][1000 genomes]
rs7893270	1.00[ASN][1000 genomes]
rs7894145	0.96[CEU][hapmap];1.00[ASN][1000 genomes]
rs7909191	1.00[ASN][1000 genomes]
rs7909581	1.00[ASN][1000 genomes]
rs7913340	0.84[CEU][hapmap];1.00[ASN][1000 genomes]
rs7914859	0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9419746	1.00[ASN][1000 genomes]
rs9633695	1.00[ASN][1000 genomes]
rs973733	0.82[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:21 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:94581600-94592800	Weak transcription	Lung	lung
2	chr10:94582600-94590400	Weak transcription	Primary neutrophils fromperipheralblood	blood
3	chr10:94582800-94589000	Weak transcription	Fetal Muscle Leg	muscle
4	chr10:94582800-94589200	Weak transcription	Spleen	Spleen
5	chr10:94582800-94592800	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
6	chr10:94583000-94590400	Weak transcription	Primary hematopoietic stem cells	blood
7	chr10:94585400-94588400	Enhancers	HUVEC	blood vessel
8	chr10:94585400-94588600	Enhancers	K562	blood
9	chr10:94585600-94589200	Weak transcription	Right Atrium	heart
10	chr10:94585600-94593000	Weak transcription	Psoas Muscle	Psoas
11	chr10:94585800-94587200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
12	chr10:94586200-94587400	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
13	chr10:94586200-94590200	Weak transcription	Primary B cells from peripheral blood	blood
14	chr10:94586400-94590400	Weak transcription	Primary monocytes fromperipheralblood	blood
15	chr10:94586400-94590400	Weak transcription	HepG2	liver
16	chr10:94586400-94590400	Weak transcription	Monocytes-CD14+_RO01746	blood
17	chr10:94586600-94587600	Enhancers	Left Ventricle	heart
18	chr10:94586600-94590200	Weak transcription	Primary hematopoietic stem cells short term culture	blood
19	chr10:94586800-94589000	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
20	chr10:94586800-94590400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
21	chr10:94586800-94590400	Weak transcription	Skeletal Muscle Male	skeletal muscle

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