Variant report

Variant	rs1119511
Chromosome Location	chr22:33335279-33335280
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	22:32920308-32927723..22:33332921-33336467	Hela-S3	cervix:
2	22:32170492-32188129..22:33332921-33336467	Hela-S3	cervix:
3	22:32437694-32446418..22:33332921-33336467	Hela-S3	cervix:

Variant related genes	Relation type
ENSG00000100170	Chromatin interaction
ENSG00000100150	Chromatin interaction
ENSG00000185666	Chromatin interaction

Extended variants
information (count: 49 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:49)

rs_ID	r²[population]
rs1005664	1.00[CEU][hapmap]
rs10222206	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10222253	1.00[CEU][hapmap]
rs10222305	0.82[AFR][1000 genomes]
rs11089596	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11089597	1.00[CEU][hapmap];1.00[YRI][hapmap];0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11089602	1.00[CEU][hapmap]
rs1119512	1.00[CEU][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11912124	1.00[EUR][1000 genomes]
rs11914041	1.00[EUR][1000 genomes]
rs12167310	1.00[CEU][hapmap]
rs12168142	1.00[CEU][hapmap]
rs12373961	0.91[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs16991203	1.00[CEU][hapmap]
rs16991580	1.00[CEU][hapmap]
rs16991605	1.00[YRI][hapmap];0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs1894457	1.00[CEU][hapmap]
rs1988647	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs56076355	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs56095662	0.88[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs5754327	1.00[CEU][hapmap]
rs5998651	1.00[CEU][hapmap]
rs5998653	1.00[CEU][hapmap]
rs5998658	1.00[CEU][hapmap]
rs695224	0.83[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs7285055	1.00[CEU][hapmap]
rs7364251	1.00[EUR][1000 genomes]
rs7364286	1.00[EUR][1000 genomes]
rs8140502	1.00[CEU][hapmap];1.00[YRI][hapmap];0.90[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs9619309	1.00[CEU][hapmap]
rs9619310	1.00[CEU][hapmap]
rs9619319	0.99[AFR][1000 genomes]
rs9619320	0.93[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs9619322	1.00[CEU][hapmap];1.00[YRI][hapmap];1.00[EUR][1000 genomes]
rs9619323	1.00[CEU][hapmap]
rs9621566	1.00[CEU][hapmap]
rs9621578	1.00[CEU][hapmap]
rs9621599	1.00[CEU][hapmap]
rs9621600	1.00[CEU][hapmap]
rs9621606	1.00[CEU][hapmap];1.00[YRI][hapmap];0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9621607	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9621608	1.00[CEU][hapmap];1.00[YRI][hapmap];0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9621609	1.00[CEU][hapmap];1.00[YRI][hapmap];0.99[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs9621610	1.00[CEU][hapmap];1.00[YRI][hapmap];0.93[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs9621613	0.94[YRI][hapmap]
rs9621614	0.91[YRI][hapmap];1.00[EUR][1000 genomes]
rs9621615	1.00[CEU][hapmap];1.00[YRI][hapmap];0.91[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs9621622	1.00[CEU][hapmap]
rs9621627	1.00[CEU][hapmap]

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr22:33314000-33380800	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
2	chr22:33328600-33335400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
3	chr22:33329200-33336000	Weak transcription	HUES48 Cell Line	embryonic stem cell
4	chr22:33331400-33342800	Weak transcription	Fetal Heart	heart
5	chr22:33332600-33336600	Weak transcription	HepG2	liver
6	chr22:33334800-33336200	Weak transcription	H1 Cell Line	embryonic stem cell
7	chr22:33335000-33337400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell

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