The 2.0 version of rSNPBase

Variant report

Variant rs11679026
Chromosome Location chr2:231245476-231245477
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:85 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:231212800-231253600 Weak transcription Gastric stomach
2 chr2:231212800-231253600 Weak transcription HMEC breast
3 chr2:231212800-231259200 Weak transcription Small Intestine intestine
4 chr2:231212800-231262400 Weak transcription K562 blood
5 chr2:231220000-231275800 Weak transcription Stomach Mucosa stomach
6 chr2:231222200-231253400 Weak transcription Colonic Mucosa Colon
7 chr2:231222200-231273200 Weak transcription Skeletal Muscle Male skeletal muscle
8 chr2:231223200-231253600 Weak transcription NHLF lung
9 chr2:231223400-231257800 Weak transcription NH-A brain
10 chr2:231223600-231263600 Weak transcription Fetal Kidney kidney
11 chr2:231224200-231254000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
12 chr2:231225200-231268000 Weak transcription Colon Smooth Muscle Colon
13 chr2:231226600-231245600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
14 chr2:231226600-231253800 Weak transcription Fetal Stomach stomach
15 chr2:231226800-231249800 Weak transcription Lung lung
16 chr2:231226800-231253600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
17 chr2:231226800-231253600 Weak transcription Pancreas Pancrea
18 chr2:231227000-231251400 Weak transcription HSMMtube muscle
19 chr2:231228800-231260000 Strong transcription Primary B cells from peripheral blood blood
20 chr2:231228800-231275600 Weak transcription Psoas Muscle Psoas
21 chr2:231231600-231246600 Strong transcription Primary T helper cells PMA-I stimulated --
22 chr2:231232200-231260400 Weak transcription Fetal Lung lung
23 chr2:231234200-231249600 Weak transcription Primary neutrophils fromperipheralblood blood
24 chr2:231234200-231253600 Weak transcription Esophagus oesophagus
25 chr2:231234200-231274400 Weak transcription Brain Hippocampus Middle brain
26 chr2:231234400-231259400 Weak transcription Fetal Intestine Small intestine
27 chr2:231235800-231245800 Weak transcription Spleen Spleen
28 chr2:231236000-231251600 Weak transcription NHDF-Ad bronchial
29 chr2:231236800-231249400 Weak transcription Aorta Aorta
30 chr2:231236800-231250200 Weak transcription Primary T killer memory cells from peripheral blood blood
31 chr2:231236800-231251600 Weak transcription Rectal Smooth Muscle rectum
32 chr2:231236800-231260000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
33 chr2:231237000-231245600 Weak transcription Placenta Placenta
34 chr2:231237000-231249200 Weak transcription Fetal Intestine Large intestine
35 chr2:231237000-231249800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
36 chr2:231237000-231249800 Weak transcription Muscle Satellite Cultured Cells --
37 chr2:231237000-231251800 Weak transcription HUVEC blood vessel
38 chr2:231237000-231253600 Weak transcription GM12878-XiMat blood
39 chr2:231237000-231264800 Weak transcription HepG2 liver
40 chr2:231237200-231246000 Weak transcription Thymus Thymus
41 chr2:231237200-231249400 Weak transcription Fetal Thymus thymus
42 chr2:231237200-231264800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
43 chr2:231238000-231253800 Weak transcription Fetal Muscle Leg muscle
44 chr2:231238200-231245600 Weak transcription Adipose Nuclei Adipose
45 chr2:231238200-231249400 Weak transcription Stomach Smooth Muscle stomach
46 chr2:231238200-231253600 Weak transcription Breast Myoepithelial Primary Cells Breast
47 chr2:231238200-231253600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
48 chr2:231238200-231257600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
49 chr2:231238400-231245800 Weak transcription Fetal Adrenal Gland Adrenal Gland
50 chr2:231238400-231246200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell

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Last update: Aug 31, 2015