The 2.0 version of rSNPBase

Variant report

Variant rs56052963
Chromosome Location chr2:231268342-231268343
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:90 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:231220000-231275800 Weak transcription Stomach Mucosa stomach
2 chr2:231222200-231273200 Weak transcription Skeletal Muscle Male skeletal muscle
3 chr2:231228800-231275600 Weak transcription Psoas Muscle Psoas
4 chr2:231234200-231274400 Weak transcription Brain Hippocampus Middle brain
5 chr2:231248000-231274600 Weak transcription ES-I3 Cell Line embryonic stem cell
6 chr2:231249000-231273200 Weak transcription Fetal Muscle Trunk muscle
7 chr2:231250200-231273200 Weak transcription Right Ventricle heart
8 chr2:231252600-231272600 Weak transcription NHDF-Ad bronchial
9 chr2:231254200-231272800 Weak transcription NHEK skin
10 chr2:231255200-231275600 Weak transcription HMEC breast
11 chr2:231258200-231273000 Weak transcription NH-A brain
12 chr2:231258800-231275600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
13 chr2:231260200-231275400 Weak transcription Small Intestine intestine
14 chr2:231260800-231272000 Strong transcription Primary T regulatory cells fromperipheralblood blood
15 chr2:231261000-231268400 Weak transcription Fetal Lung lung
16 chr2:231261000-231270600 Strong transcription Monocytes-CD14+_RO01746 blood
17 chr2:231261000-231271400 Strong transcription Primary hematopoietic stem cells short term culture blood
18 chr2:231261000-231271400 Strong transcription Primary T helper cells PMA-I stimulated --
19 chr2:231261000-231271800 Strong transcription Primary B cells from peripheral blood blood
20 chr2:231261000-231272000 Strong transcription Primary T helper cells fromperipheralblood blood
21 chr2:231261200-231271800 Strong transcription Primary Natural Killer cells fromperipheralblood blood
22 chr2:231262800-231273200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
23 chr2:231264000-231270600 Strong transcription Liver Liver
24 chr2:231264600-231275800 Weak transcription K562 blood
25 chr2:231265000-231275600 Weak transcription Fetal Heart heart
26 chr2:231265200-231272800 Weak transcription HSMM muscle
27 chr2:231265200-231273000 Weak transcription Primary T killer naive cells fromperipheralblood blood
28 chr2:231265400-231270200 Weak transcription HSMMtube muscle
29 chr2:231265400-231272800 Weak transcription Muscle Satellite Cultured Cells --
30 chr2:231265400-231275400 Weak transcription HepG2 liver
31 chr2:231265600-231268400 Weak transcription Gastric stomach
32 chr2:231265600-231268600 Weak transcription Primary T helper naive cells from peripheral blood blood
33 chr2:231265600-231269600 Weak transcription Rectal Smooth Muscle rectum
34 chr2:231265600-231270000 Weak transcription HUVEC blood vessel
35 chr2:231265600-231272600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
36 chr2:231265600-231273000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
37 chr2:231265600-231273000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
38 chr2:231265600-231273200 Weak transcription Aorta Aorta
39 chr2:231265600-231273200 Weak transcription Fetal Muscle Leg muscle
40 chr2:231265600-231273200 Weak transcription Pancreas Pancrea
41 chr2:231265600-231273200 Weak transcription Skeletal Muscle Female skeletal muscle
42 chr2:231265600-231275400 Weak transcription Colonic Mucosa Colon
43 chr2:231265600-231275400 Weak transcription Rectal Mucosa Donor 29 rectum
44 chr2:231265600-231275600 Weak transcription Fetal Intestine Large intestine
45 chr2:231266400-231269800 Strong transcription Primary monocytes fromperipheralblood blood
46 chr2:231266400-231270800 Strong transcription Fetal Adrenal Gland Adrenal Gland
47 chr2:231266400-231272600 Strong transcription Primary B cells from cord blood blood
48 chr2:231266600-231268800 Strong transcription Primary T helper memory cells from peripheral blood 1 blood
49 chr2:231266600-231270200 Strong transcription Adipose Nuclei Adipose
50 chr2:231266600-231272400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --

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Last update: Aug 31, 2015