The 2.0 version of rSNPBase

Variant report

Variant rs55637456
Chromosome Location chr2:231309139-231309140
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:94 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:231283600-231309200 Weak transcription Stomach Smooth Muscle stomach
2 chr2:231288800-231319000 Weak transcription Fetal Kidney kidney
3 chr2:231288800-231356000 Weak transcription Stomach Mucosa stomach
4 chr2:231289000-231309200 Weak transcription Aorta Aorta
5 chr2:231294200-231309600 Weak transcription Placenta Amnion Placenta Amnion
6 chr2:231294200-231311600 Weak transcription Colon Smooth Muscle Colon
7 chr2:231295200-231309200 Weak transcription Skeletal Muscle Male skeletal muscle
8 chr2:231296000-231309400 Weak transcription Colonic Mucosa Colon
9 chr2:231296000-231310400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
10 chr2:231296200-231309200 Weak transcription Fetal Stomach stomach
11 chr2:231296200-231309200 Weak transcription Spleen Spleen
12 chr2:231301400-231309200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
13 chr2:231301400-231309200 Weak transcription Lung lung
14 chr2:231301400-231309200 Weak transcription Ovary ovary
15 chr2:231301400-231309200 Weak transcription Pancreas Pancrea
16 chr2:231301400-231314400 Weak transcription Psoas Muscle Psoas
17 chr2:231301800-231309200 Weak transcription Fetal Lung lung
18 chr2:231301800-231312000 Weak transcription HepG2 liver
19 chr2:231301800-231345000 Weak transcription A549 lung
20 chr2:231303200-231317200 Genic enhancers Primary B cells from peripheral blood blood
21 chr2:231304200-231309200 Weak transcription Right Ventricle heart
22 chr2:231304400-231320800 Weak transcription Brain Hippocampus Middle brain
23 chr2:231306000-231314400 Weak transcription Esophagus oesophagus
24 chr2:231306600-231309200 Weak transcription NH-A brain
25 chr2:231306600-231309400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
26 chr2:231306600-231310400 Weak transcription Skeletal Muscle Female skeletal muscle
27 chr2:231306600-231312000 Strong transcription Primary monocytes fromperipheralblood blood
28 chr2:231306600-231323400 Weak transcription K562 blood
29 chr2:231306800-231311600 Genic enhancers GM12878-XiMat blood
30 chr2:231306800-231311800 Strong transcription Monocytes-CD14+_RO01746 blood
31 chr2:231306800-231318200 Weak transcription Pancreatic Islets Pancreatic Islet
32 chr2:231307400-231309200 Weak transcription Fetal Muscle Trunk muscle
33 chr2:231307400-231312600 Genic enhancers Primary B cells from cord blood blood
34 chr2:231307400-231317600 Strong transcription Primary hematopoietic stem cells short term culture blood
35 chr2:231307400-231318200 Strong transcription Breast Myoepithelial Primary Cells Breast
36 chr2:231307400-231321800 Strong transcription Liver Liver
37 chr2:231307600-231309600 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
38 chr2:231307600-231311400 Strong transcription Thymus Thymus
39 chr2:231307600-231311600 Weak transcription Hela-S3 cervix
40 chr2:231307600-231311800 Strong transcription Fetal Thymus thymus
41 chr2:231307600-231312200 Strong transcription Sigmoid Colon Sigmoid Colon
42 chr2:231307600-231312400 Strong transcription Primary neutrophils fromperipheralblood blood
43 chr2:231307600-231315000 Strong transcription Fetal Muscle Leg muscle
44 chr2:231307600-231315000 Strong transcription Left Ventricle heart
45 chr2:231307600-231315400 Strong transcription Rectal Mucosa Donor 31 rectum
46 chr2:231307600-231316600 Strong transcription Primary hematopoietic stem cells blood
47 chr2:231307600-231318200 Strong transcription Rectal Mucosa Donor 29 rectum
48 chr2:231307600-231319600 Strong transcription Dnd41 blood
49 chr2:231307600-231336600 Strong transcription Duodenum Mucosa Duodenum
50 chr2:231307800-231309400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --

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Last update: Aug 31, 2015