The 2.0 version of rSNPBase

Variant report

Variant rs17333189
Chromosome Location chr2:231307584-231307585
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:92 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:231283600-231309200 Weak transcription Stomach Smooth Muscle stomach
2 chr2:231288800-231319000 Weak transcription Fetal Kidney kidney
3 chr2:231288800-231356000 Weak transcription Stomach Mucosa stomach
4 chr2:231289000-231309200 Weak transcription Aorta Aorta
5 chr2:231294200-231309600 Weak transcription Placenta Amnion Placenta Amnion
6 chr2:231294200-231311600 Weak transcription Colon Smooth Muscle Colon
7 chr2:231295200-231309200 Weak transcription Skeletal Muscle Male skeletal muscle
8 chr2:231295800-231307800 Weak transcription Fetal Adrenal Gland Adrenal Gland
9 chr2:231295800-231309000 Weak transcription Small Intestine intestine
10 chr2:231296000-231309400 Weak transcription Colonic Mucosa Colon
11 chr2:231296000-231310400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
12 chr2:231296200-231308400 Weak transcription Gastric stomach
13 chr2:231296200-231309200 Weak transcription Fetal Stomach stomach
14 chr2:231296200-231309200 Weak transcription Spleen Spleen
15 chr2:231296400-231307600 Weak transcription Sigmoid Colon Sigmoid Colon
16 chr2:231299600-231308200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
17 chr2:231301400-231307600 Weak transcription Fetal Muscle Leg muscle
18 chr2:231301400-231307600 Weak transcription Fetal Thymus thymus
19 chr2:231301400-231307600 Weak transcription Left Ventricle heart
20 chr2:231301400-231307800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
21 chr2:231301400-231308400 Weak transcription Rectal Smooth Muscle rectum
22 chr2:231301400-231309200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
23 chr2:231301400-231309200 Weak transcription Lung lung
24 chr2:231301400-231309200 Weak transcription Ovary ovary
25 chr2:231301400-231309200 Weak transcription Pancreas Pancrea
26 chr2:231301400-231314400 Weak transcription Psoas Muscle Psoas
27 chr2:231301600-231307600 Weak transcription Primary T cells fromperipheralblood blood
28 chr2:231301800-231307600 Weak transcription Duodenum Mucosa Duodenum
29 chr2:231301800-231307600 Weak transcription Rectal Mucosa Donor 29 rectum
30 chr2:231301800-231307600 Weak transcription Rectal Mucosa Donor 31 rectum
31 chr2:231301800-231307800 Weak transcription Duodenum Smooth Muscle Duodenum
32 chr2:231301800-231308000 Weak transcription Placenta Placenta
33 chr2:231301800-231309200 Weak transcription Fetal Lung lung
34 chr2:231301800-231312000 Weak transcription HepG2 liver
35 chr2:231301800-231345000 Weak transcription A549 lung
36 chr2:231302600-231308000 Weak transcription Fetal Intestine Small intestine
37 chr2:231303200-231317200 Genic enhancers Primary B cells from peripheral blood blood
38 chr2:231303600-231307800 Enhancers Primary T helper memory cells from peripheral blood 1 blood
39 chr2:231303800-231307600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
40 chr2:231303800-231307800 Enhancers Primary T killer memory cells from peripheral blood blood
41 chr2:231304000-231307600 Enhancers Primary T helper naive cells fromperipheralblood blood
42 chr2:231304200-231308200 Weak transcription Fetal Intestine Large intestine
43 chr2:231304200-231309200 Weak transcription Right Ventricle heart
44 chr2:231304400-231320800 Weak transcription Brain Hippocampus Middle brain
45 chr2:231304800-231307600 Weak transcription Dnd41 blood
46 chr2:231305000-231307800 Enhancers HUVEC blood vessel
47 chr2:231306000-231314400 Weak transcription Esophagus oesophagus
48 chr2:231306400-231307600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
49 chr2:231306400-231307800 Enhancers Primary T killer naive cells fromperipheralblood blood
50 chr2:231306600-231307600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin

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Last update: Aug 31, 2015