The 2.0 version of rSNPBase

Variant report

Variant rs72495180
Chromosome Location chr2:231263170-231263171
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:92 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:231220000-231275800 Weak transcription Stomach Mucosa stomach
2 chr2:231222200-231273200 Weak transcription Skeletal Muscle Male skeletal muscle
3 chr2:231223600-231263600 Weak transcription Fetal Kidney kidney
4 chr2:231225200-231268000 Weak transcription Colon Smooth Muscle Colon
5 chr2:231228800-231275600 Weak transcription Psoas Muscle Psoas
6 chr2:231234200-231274400 Weak transcription Brain Hippocampus Middle brain
7 chr2:231237000-231264800 Weak transcription HepG2 liver
8 chr2:231237200-231264800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
9 chr2:231245200-231265600 Strong transcription Primary T cells fromperipheralblood blood
10 chr2:231245800-231266000 Strong transcription Fetal Adrenal Gland Adrenal Gland
11 chr2:231248000-231265400 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
12 chr2:231248000-231274600 Weak transcription ES-I3 Cell Line embryonic stem cell
13 chr2:231249000-231273200 Weak transcription Fetal Muscle Trunk muscle
14 chr2:231250200-231273200 Weak transcription Right Ventricle heart
15 chr2:231252600-231272600 Weak transcription NHDF-Ad bronchial
16 chr2:231253600-231265800 Strong transcription Sigmoid Colon Sigmoid Colon
17 chr2:231254000-231264800 Weak transcription Colonic Mucosa Colon
18 chr2:231254200-231272800 Weak transcription NHEK skin
19 chr2:231254400-231264800 Weak transcription Gastric stomach
20 chr2:231254400-231265000 Weak transcription Pancreas Pancrea
21 chr2:231254400-231267800 Weak transcription NHLF lung
22 chr2:231255200-231275600 Weak transcription HMEC breast
23 chr2:231256200-231265000 Weak transcription HUVEC blood vessel
24 chr2:231258000-231267600 Weak transcription Esophagus oesophagus
25 chr2:231258200-231273000 Weak transcription NH-A brain
26 chr2:231258600-231265400 Strong transcription Muscle Satellite Cultured Cells --
27 chr2:231258800-231275600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
28 chr2:231259600-231264200 Weak transcription Fetal Intestine Large intestine
29 chr2:231259600-231268200 Weak transcription Rectal Mucosa Donor 31 rectum
30 chr2:231260000-231265000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
31 chr2:231260200-231275400 Weak transcription Small Intestine intestine
32 chr2:231260800-231264200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
33 chr2:231260800-231264600 Weak transcription Skeletal Muscle Female skeletal muscle
34 chr2:231260800-231264800 Weak transcription Primary neutrophils fromperipheralblood blood
35 chr2:231260800-231265600 Strong transcription Primary T cells from cord blood blood
36 chr2:231260800-231272000 Strong transcription Primary T regulatory cells fromperipheralblood blood
37 chr2:231261000-231263800 Weak transcription Primary T killer memory cells from peripheral blood blood
38 chr2:231261000-231264200 Weak transcription Rectal Smooth Muscle rectum
39 chr2:231261000-231264200 Weak transcription Spleen Spleen
40 chr2:231261000-231264400 Weak transcription HSMMtube muscle
41 chr2:231261000-231264800 Weak transcription Duodenum Smooth Muscle Duodenum
42 chr2:231261000-231264800 Weak transcription Fetal Muscle Leg muscle
43 chr2:231261000-231264800 Weak transcription Fetal Thymus thymus
44 chr2:231261000-231265600 Strong transcription Primary T helper 17 cells PMA-I stimulated --
45 chr2:231261000-231265600 Strong transcription Rectal Mucosa Donor 29 rectum
46 chr2:231261000-231268400 Weak transcription Fetal Lung lung
47 chr2:231261000-231270600 Strong transcription Monocytes-CD14+_RO01746 blood
48 chr2:231261000-231271400 Strong transcription Primary hematopoietic stem cells short term culture blood
49 chr2:231261000-231271400 Strong transcription Primary T helper cells PMA-I stimulated --
50 chr2:231261000-231271800 Strong transcription Primary B cells from peripheral blood blood

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Last update: Aug 31, 2015