The 2.0 version of rSNPBase

Variant report

Variant rs56401027
Chromosome Location chr2:231240172-231240173
allele A/G/T
Outlinks Ensembl   UCSC
Chromatin state (count:85 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:231212800-231253600 Weak transcription Gastric stomach
2 chr2:231212800-231253600 Weak transcription HMEC breast
3 chr2:231212800-231259200 Weak transcription Small Intestine intestine
4 chr2:231212800-231262400 Weak transcription K562 blood
5 chr2:231220000-231275800 Weak transcription Stomach Mucosa stomach
6 chr2:231222200-231253400 Weak transcription Colonic Mucosa Colon
7 chr2:231222200-231273200 Weak transcription Skeletal Muscle Male skeletal muscle
8 chr2:231223200-231253600 Weak transcription NHLF lung
9 chr2:231223400-231257800 Weak transcription NH-A brain
10 chr2:231223600-231263600 Weak transcription Fetal Kidney kidney
11 chr2:231224200-231254000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
12 chr2:231225200-231268000 Weak transcription Colon Smooth Muscle Colon
13 chr2:231225600-231244600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
14 chr2:231226600-231245600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
15 chr2:231226600-231253800 Weak transcription Fetal Stomach stomach
16 chr2:231226800-231249800 Weak transcription Lung lung
17 chr2:231226800-231253600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
18 chr2:231226800-231253600 Weak transcription Pancreas Pancrea
19 chr2:231227000-231251400 Weak transcription HSMMtube muscle
20 chr2:231227200-231242400 Weak transcription HSMM muscle
21 chr2:231228800-231260000 Strong transcription Primary B cells from peripheral blood blood
22 chr2:231228800-231275600 Weak transcription Psoas Muscle Psoas
23 chr2:231231400-231243600 Strong transcription Primary T helper cells fromperipheralblood blood
24 chr2:231231600-231246600 Strong transcription Primary T helper cells PMA-I stimulated --
25 chr2:231232200-231260400 Weak transcription Fetal Lung lung
26 chr2:231232400-231243400 Strong transcription Primary Natural Killer cells fromperipheralblood blood
27 chr2:231232800-231241000 Strong transcription Liver Liver
28 chr2:231234000-231242200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
29 chr2:231234200-231249600 Weak transcription Primary neutrophils fromperipheralblood blood
30 chr2:231234200-231253600 Weak transcription Esophagus oesophagus
31 chr2:231234200-231274400 Weak transcription Brain Hippocampus Middle brain
32 chr2:231234400-231259400 Weak transcription Fetal Intestine Small intestine
33 chr2:231235000-231240800 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
34 chr2:231235600-231240400 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
35 chr2:231235800-231243800 Strong transcription Monocytes-CD14+_RO01746 blood
36 chr2:231235800-231245800 Weak transcription Spleen Spleen
37 chr2:231236000-231251600 Weak transcription NHDF-Ad bronchial
38 chr2:231236800-231249400 Weak transcription Aorta Aorta
39 chr2:231236800-231250200 Weak transcription Primary T killer memory cells from peripheral blood blood
40 chr2:231236800-231251600 Weak transcription Rectal Smooth Muscle rectum
41 chr2:231236800-231260000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
42 chr2:231237000-231245600 Weak transcription Placenta Placenta
43 chr2:231237000-231249200 Weak transcription Fetal Intestine Large intestine
44 chr2:231237000-231249800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
45 chr2:231237000-231249800 Weak transcription Muscle Satellite Cultured Cells --
46 chr2:231237000-231251800 Weak transcription HUVEC blood vessel
47 chr2:231237000-231253600 Weak transcription GM12878-XiMat blood
48 chr2:231237000-231264800 Weak transcription HepG2 liver
49 chr2:231237200-231246000 Weak transcription Thymus Thymus
50 chr2:231237200-231249400 Weak transcription Fetal Thymus thymus

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015