The 2.0 version of rSNPBase

Variant report

Variant rs6725726
Chromosome Location chr2:231278722-231278723
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:96 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:231277200-231278800 Enhancers Stomach Mucosa stomach
2 chr2:231277200-231278800 Weak transcription HMEC breast
3 chr2:231277200-231279000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
4 chr2:231277200-231279600 Weak transcription NHDF-Ad bronchial
5 chr2:231277200-231280400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
6 chr2:231277200-231280400 Enhancers Primary Natural Killer cells fromperipheralblood blood
7 chr2:231277200-231280400 Enhancers Primary T killer naive cells fromperipheralblood blood
8 chr2:231277200-231280400 Weak transcription Aorta Aorta
9 chr2:231277200-231280400 Weak transcription Placenta Amnion Placenta Amnion
10 chr2:231277200-231280400 Weak transcription Psoas Muscle Psoas
11 chr2:231277200-231280400 Weak transcription Small Intestine intestine
12 chr2:231277200-231280400 Weak transcription HSMM muscle
13 chr2:231277200-231280400 Weak transcription HSMMtube muscle
14 chr2:231277200-231280400 Weak transcription NH-A brain
15 chr2:231277200-231280800 Weak transcription Brain Inferior Temporal Lobe brain
16 chr2:231277400-231278800 Enhancers Liver Liver
17 chr2:231277400-231279000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
18 chr2:231277400-231279200 Weak transcription Placenta Placenta
19 chr2:231277400-231279800 Enhancers Primary T helper naive cells fromperipheralblood blood
20 chr2:231277400-231279800 Weak transcription Osteobl bone
21 chr2:231277400-231280000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
22 chr2:231277400-231280000 Weak transcription Primary hematopoietic stem cells short term culture blood
23 chr2:231277400-231280200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
24 chr2:231277400-231280200 Enhancers Primary T cells from cord blood blood
25 chr2:231277400-231280200 Weak transcription Muscle Satellite Cultured Cells --
26 chr2:231277400-231280200 Weak transcription Rectal Mucosa Donor 29 rectum
27 chr2:231277400-231280200 Weak transcription HUVEC blood vessel
28 chr2:231277400-231280400 Enhancers Primary monocytes fromperipheralblood blood
29 chr2:231277400-231280400 Enhancers Primary B cells from peripheral blood blood
30 chr2:231277400-231280400 Enhancers Primary T cells fromperipheralblood blood
31 chr2:231277400-231280400 Enhancers Primary T helper memory cells from peripheral blood 2 blood
32 chr2:231277400-231280400 Enhancers Primary T helper naive cells from peripheral blood blood
33 chr2:231277400-231280400 Enhancers Primary T helper memory cells from peripheral blood 1 blood
34 chr2:231277400-231280400 Enhancers Primary T helper cells PMA-I stimulated --
35 chr2:231277400-231280400 Enhancers Primary T helper 17 cells PMA-I stimulated --
36 chr2:231277400-231280400 Enhancers Primary T killer memory cells from peripheral blood blood
37 chr2:231277400-231280400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
38 chr2:231277400-231280400 Weak transcription Brain Hippocampus Middle brain
39 chr2:231277400-231280400 Weak transcription Fetal Lung lung
40 chr2:231277400-231280400 Weak transcription A549 lung
41 chr2:231277400-231280400 Enhancers HepG2 liver
42 chr2:231277400-231280600 Weak transcription Fetal Brain Male brain
43 chr2:231277400-231280600 Weak transcription Fetal Kidney kidney
44 chr2:231277600-231278800 Weak transcription Sigmoid Colon Sigmoid Colon
45 chr2:231277600-231279600 Weak transcription Rectal Smooth Muscle rectum
46 chr2:231277600-231279800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
47 chr2:231277600-231279800 Weak transcription Colon Smooth Muscle Colon
48 chr2:231277600-231279800 Weak transcription Fetal Muscle Leg muscle
49 chr2:231277600-231279800 Weak transcription Pancreas Pancrea
50 chr2:231277600-231280000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin

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Last update: Aug 31, 2015