The 2.0 version of rSNPBase

Variant report

Variant rs56105857
Chromosome Location chr2:231260319-231260320
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:89 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:231212800-231262400 Weak transcription K562 blood
2 chr2:231220000-231275800 Weak transcription Stomach Mucosa stomach
3 chr2:231222200-231273200 Weak transcription Skeletal Muscle Male skeletal muscle
4 chr2:231223600-231263600 Weak transcription Fetal Kidney kidney
5 chr2:231225200-231268000 Weak transcription Colon Smooth Muscle Colon
6 chr2:231228800-231275600 Weak transcription Psoas Muscle Psoas
7 chr2:231232200-231260400 Weak transcription Fetal Lung lung
8 chr2:231234200-231274400 Weak transcription Brain Hippocampus Middle brain
9 chr2:231237000-231264800 Weak transcription HepG2 liver
10 chr2:231237200-231264800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
11 chr2:231245000-231260400 Strong transcription Primary Natural Killer cells fromperipheralblood blood
12 chr2:231245200-231265600 Strong transcription Primary T cells fromperipheralblood blood
13 chr2:231245400-231260400 Strong transcription Primary T regulatory cells fromperipheralblood blood
14 chr2:231245800-231266000 Strong transcription Fetal Adrenal Gland Adrenal Gland
15 chr2:231248000-231262600 Strong transcription Liver Liver
16 chr2:231248000-231265400 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
17 chr2:231248000-231274600 Weak transcription ES-I3 Cell Line embryonic stem cell
18 chr2:231248400-231260800 Strong transcription Dnd41 blood
19 chr2:231249000-231260600 Strong transcription Primary T helper 17 cells PMA-I stimulated --
20 chr2:231249000-231262000 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
21 chr2:231249000-231273200 Weak transcription Fetal Muscle Trunk muscle
22 chr2:231249200-231261800 Strong transcription Primary T helper memory cells from peripheral blood 1 blood
23 chr2:231249200-231262000 Strong transcription Primary T killer naive cells fromperipheralblood blood
24 chr2:231249400-231260400 Strong transcription Adipose Nuclei Adipose
25 chr2:231249400-231260400 Strong transcription Duodenum Smooth Muscle Duodenum
26 chr2:231249400-231262000 Strong transcription Stomach Smooth Muscle stomach
27 chr2:231249600-231260600 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
28 chr2:231249800-231262600 Strong transcription Duodenum Mucosa Duodenum
29 chr2:231250200-231273200 Weak transcription Right Ventricle heart
30 chr2:231251600-231261400 Strong transcription HSMM muscle
31 chr2:231252000-231260600 Weak transcription Rectal Smooth Muscle rectum
32 chr2:231252000-231261400 Strong transcription Primary T helper naive cells from peripheral blood blood
33 chr2:231252600-231272600 Weak transcription NHDF-Ad bronchial
34 chr2:231253400-231262600 Strong transcription Lung lung
35 chr2:231253600-231260400 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
36 chr2:231253600-231262200 Strong transcription Left Ventricle heart
37 chr2:231253600-231265800 Strong transcription Sigmoid Colon Sigmoid Colon
38 chr2:231254000-231264800 Weak transcription Colonic Mucosa Colon
39 chr2:231254200-231272800 Weak transcription NHEK skin
40 chr2:231254400-231264800 Weak transcription Gastric stomach
41 chr2:231254400-231265000 Weak transcription Pancreas Pancrea
42 chr2:231254400-231267800 Weak transcription NHLF lung
43 chr2:231255200-231275600 Weak transcription HMEC breast
44 chr2:231256200-231265000 Weak transcription HUVEC blood vessel
45 chr2:231256400-231260400 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
46 chr2:231256400-231260600 Strong transcription Primary T killer memory cells from peripheral blood blood
47 chr2:231257000-231260400 Weak transcription Fetal Muscle Leg muscle
48 chr2:231258000-231267600 Weak transcription Esophagus oesophagus
49 chr2:231258200-231260400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
50 chr2:231258200-231273000 Weak transcription NH-A brain

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Last update: Aug 31, 2015