The 2.0 version of rSNPBase

Variant report

Variant rs55964110
Chromosome Location chr2:231257336-231257337
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:90 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:231212800-231259200 Weak transcription Small Intestine intestine
2 chr2:231212800-231262400 Weak transcription K562 blood
3 chr2:231220000-231275800 Weak transcription Stomach Mucosa stomach
4 chr2:231222200-231273200 Weak transcription Skeletal Muscle Male skeletal muscle
5 chr2:231223400-231257800 Weak transcription NH-A brain
6 chr2:231223600-231263600 Weak transcription Fetal Kidney kidney
7 chr2:231225200-231268000 Weak transcription Colon Smooth Muscle Colon
8 chr2:231228800-231260000 Strong transcription Primary B cells from peripheral blood blood
9 chr2:231228800-231275600 Weak transcription Psoas Muscle Psoas
10 chr2:231232200-231260400 Weak transcription Fetal Lung lung
11 chr2:231234200-231274400 Weak transcription Brain Hippocampus Middle brain
12 chr2:231234400-231259400 Weak transcription Fetal Intestine Small intestine
13 chr2:231236800-231260000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
14 chr2:231237000-231264800 Weak transcription HepG2 liver
15 chr2:231237200-231264800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
16 chr2:231238200-231257600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
17 chr2:231240000-231259600 Strong transcription Primary B cells from cord blood blood
18 chr2:231244600-231259400 Strong transcription Primary T helper cells fromperipheralblood blood
19 chr2:231244600-231260000 Strong transcription Monocytes-CD14+_RO01746 blood
20 chr2:231244800-231260000 Strong transcription Primary T cells from cord blood blood
21 chr2:231244800-231260000 Strong transcription Primary mononuclear cells fromperipheralblood Blood
22 chr2:231245000-231260400 Strong transcription Primary Natural Killer cells fromperipheralblood blood
23 chr2:231245200-231265600 Strong transcription Primary T cells fromperipheralblood blood
24 chr2:231245400-231260400 Strong transcription Primary T regulatory cells fromperipheralblood blood
25 chr2:231245800-231266000 Strong transcription Fetal Adrenal Gland Adrenal Gland
26 chr2:231246400-231260200 Strong transcription Placenta Placenta
27 chr2:231247600-231258800 Strong transcription Primary hematopoietic stem cells blood
28 chr2:231247600-231260000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
29 chr2:231248000-231260000 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
30 chr2:231248000-231260000 Strong transcription Primary T helper cells PMA-I stimulated --
31 chr2:231248000-231262600 Strong transcription Liver Liver
32 chr2:231248000-231265400 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
33 chr2:231248000-231274600 Weak transcription ES-I3 Cell Line embryonic stem cell
34 chr2:231248200-231259400 Strong transcription Primary monocytes fromperipheralblood blood
35 chr2:231248200-231259600 Strong transcription Rectal Mucosa Donor 31 rectum
36 chr2:231248400-231260800 Strong transcription Dnd41 blood
37 chr2:231249000-231260000 Strong transcription Rectal Mucosa Donor 29 rectum
38 chr2:231249000-231260600 Strong transcription Primary T helper 17 cells PMA-I stimulated --
39 chr2:231249000-231262000 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
40 chr2:231249000-231273200 Weak transcription Fetal Muscle Trunk muscle
41 chr2:231249200-231261800 Strong transcription Primary T helper memory cells from peripheral blood 1 blood
42 chr2:231249200-231262000 Strong transcription Primary T killer naive cells fromperipheralblood blood
43 chr2:231249400-231257400 Strong transcription Fetal Thymus thymus
44 chr2:231249400-231260400 Strong transcription Adipose Nuclei Adipose
45 chr2:231249400-231260400 Strong transcription Duodenum Smooth Muscle Duodenum
46 chr2:231249400-231262000 Strong transcription Stomach Smooth Muscle stomach
47 chr2:231249600-231260600 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
48 chr2:231249800-231257400 Strong transcription Osteobl bone
49 chr2:231249800-231262600 Strong transcription Duodenum Mucosa Duodenum
50 chr2:231250200-231273200 Weak transcription Right Ventricle heart

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Last update: Aug 31, 2015