Variant report

Variant	rs11783674
Chromosome Location	chr8:51236428-51236429
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 36 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:30)

rs_ID	r²[population]
rs1117213	0.87[ASN][1000 genomes]
rs1160764	0.87[ASN][1000 genomes]
rs1160795	0.87[ASN][1000 genomes]
rs11784464	0.87[ASN][1000 genomes]
rs12675994	0.85[ASN][1000 genomes]
rs12678703	0.85[ASN][1000 genomes]
rs13259996	0.81[AMR][1000 genomes]
rs1597432	0.87[ASN][1000 genomes]
rs1597433	0.87[ASN][1000 genomes]
rs16914780	0.87[ASN][1000 genomes]
rs1947254	0.87[ASN][1000 genomes]
rs2957598	0.87[ASN][1000 genomes]
rs34651805	0.87[ASN][1000 genomes]
rs35063719	0.85[ASN][1000 genomes]
rs4242460	0.85[ASN][1000 genomes]
rs4256602	0.84[ASN][1000 genomes]
rs4339654	0.85[ASN][1000 genomes]
rs4410921	0.85[ASN][1000 genomes]
rs4413786	0.82[AMR][1000 genomes]
rs4534138	0.87[ASN][1000 genomes]
rs4604450	0.85[ASN][1000 genomes]
rs4873143	0.87[ASN][1000 genomes]
rs4873453	0.83[ASN][1000 genomes]
rs6473114	0.85[ASN][1000 genomes]
rs6994415	0.82[AMR][1000 genomes]
rs7003725	0.87[ASN][1000 genomes]
rs7005672	0.84[ASN][1000 genomes]
rs7015950	0.85[ASN][1000 genomes]
rs7822550	0.87[ASN][1000 genomes]
rs7839253	0.85[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv916392	chr8:50827638-51395140	Enhancers Weak transcription Strong transcription Active TSS ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
2	nsv948436	chr8:51115028-51917504	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Bivalent Enhancer Strong transcription Genic enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
3	nsv6185	chr8:51213648-51237196	Enhancers Weak transcription Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
4	esv1828291	chr8:51225111-51246823	ZNF genes & repeats Weak transcription Enhancers Active TSS Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
5	esv1832233	chr8:51225111-51256438	ZNF genes & repeats Flanking Active TSS Enhancers Weak transcription Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
6	esv1827302	chr8:51225496-51246823	Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:51236200-51236600	Active TSS	Fetal Heart	heart
2	chr8:51236400-51237800	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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