Variant report

No.	Distal block	Cell Line	Cell type
1	chr2:86160879..86165285-chr2:86176010..86181999,6	MCF-7	breast:
2	chr2:86178306..86181703-chr2:86184579..86188621,5	MCF-7	breast:
3	chr2:86112970..86117219-chr2:86178282..86182179,5	MCF-7	breast:
4	chr2:86088793..86090572-chr2:86178202..86180924,2	MCF-7	breast:
5	chr2:86112745..86122516-chr2:86175080..86185190,27	MCF-7	breast:
6	chr2:86124693..86128492-chr2:86175649..86178541,3	MCF-7	breast:

Variant related genes	Relation type
ENSG00000232504	Chromatin interaction
ENSG00000115525	Chromatin interaction

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs17026701	0.82[EUR][1000 genomes]
rs17026729	0.82[EUR][1000 genomes]
rs2012798	0.90[ASN][1000 genomes]
rs4292089	0.82[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs55716007	0.82[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs57178127	0.82[EUR][1000 genomes]
rs58515922	0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs58672934	0.82[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs58686314	0.82[EUR][1000 genomes]
rs59968392	0.94[EUR][1000 genomes]
rs60981340	0.84[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61477982	0.85[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs6547646	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs6705122	0.84[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6717839	0.85[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs6718632	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6747424	0.84[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6759489	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs735737	0.84[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73943909	0.94[EUR][1000 genomes]
rs73943920	0.89[ASN][1000 genomes]
rs73945530	0.82[EUR][1000 genomes]
rs73945535	0.82[EUR][1000 genomes]
rs7570836	0.82[AMR][1000 genomes];0.94[EUR][1000 genomes]

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:86175000-86183600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
2	chr2:86175800-86180600	Enhancers	Liver	Liver
3	chr2:86176200-86180400	Enhancers	Fetal Adrenal Gland	Adrenal Gland
4	chr2:86176600-86178800	Weak transcription	Fetal Muscle Leg	muscle
5	chr2:86177000-86178600	Weak transcription	Monocytes-CD14+_RO01746	blood
6	chr2:86177000-86180800	Weak transcription	Adipose Nuclei	Adipose
7	chr2:86177200-86178800	Weak transcription	Primary monocytes fromperipheralblood	blood
8	chr2:86177200-86180000	Weak transcription	Fetal Lung	lung
9	chr2:86177400-86178400	Enhancers	HUVEC	blood vessel
10	chr2:86177800-86179600	Weak transcription	Fetal Thymus	thymus
11	chr2:86178000-86181000	Enhancers	K562	blood
12	chr2:86178200-86179200	Weak transcription	Pancreas	Pancrea

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