Variant report
| Variant | rs57178127 |
|---|---|
| Chromosome Location | chr2:86098254-86098255 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr2:86066000-86106200 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 2 | chr2:86067000-86099000 | Weak transcription | Gastric | stomach |
| 3 | chr2:86075400-86114000 | Weak transcription | Aorta | Aorta |
| 4 | chr2:86079600-86106200 | Weak transcription | Brain Germinal Matrix | brain |
| 5 | chr2:86081000-86112400 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 6 | chr2:86081600-86099200 | Weak transcription | Left Ventricle | heart |
| 7 | chr2:86081600-86100600 | Weak transcription | NHDF-Ad | bronchial |
| 8 | chr2:86082000-86099000 | Weak transcription | Right Ventricle | heart |
| 9 | chr2:86086800-86113000 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 10 | chr2:86087400-86101800 | Weak transcription | Fetal Brain Female | brain |
| 11 | chr2:86088200-86099000 | Weak transcription | Adipose Nuclei | Adipose |
| 12 | chr2:86088400-86105400 | Weak transcription | Osteobl | bone |
| 13 | chr2:86088600-86111600 | Weak transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 14 | chr2:86089000-86102600 | Weak transcription | Primary hematopoietic stem cells | blood |
| 15 | chr2:86089800-86100000 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
| 16 | chr2:86089800-86106000 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 17 | chr2:86089800-86106000 | Weak transcription | Primary T regulatory cells fromperipheralblood | blood |
| 18 | chr2:86090400-86099800 | Weak transcription | Spleen | Spleen |
| 19 | chr2:86090400-86102600 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 20 | chr2:86090400-86104600 | Weak transcription | Liver | Liver |
| 21 | chr2:86090600-86109000 | Weak transcription | Fetal Stomach | stomach |
| 22 | chr2:86090600-86110600 | Weak transcription | Fetal Muscle Trunk | muscle |
| 23 | chr2:86091400-86101400 | Weak transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 24 | chr2:86092200-86105200 | Weak transcription | Right Atrium | heart |
| 25 | chr2:86093200-86106200 | Weak transcription | Primary T cells effector/memory enriched fromperipheralblood | blood |
| 26 | chr2:86093400-86104600 | Weak transcription | Ovary | ovary |
| 27 | chr2:86093400-86105800 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 28 | chr2:86093400-86106200 | Weak transcription | Duodenum Mucosa | Duodenum |
| 29 | chr2:86093400-86106800 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 30 | chr2:86093400-86112400 | Weak transcription | Colonic Mucosa | Colon |
| 31 | chr2:86093600-86111600 | Weak transcription | Colon Smooth Muscle | Colon |
| 32 | chr2:86093800-86106000 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 33 | chr2:86093800-86113000 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 34 | chr2:86094000-86103200 | Weak transcription | Primary T killer memory cells from peripheral blood | blood |
| 35 | chr2:86094000-86105400 | Weak transcription | NH-A | brain |
| 36 | chr2:86094400-86101400 | Weak transcription | Primary T helper cells fromperipheralblood | blood |
| 37 | chr2:86094800-86101400 | Weak transcription | Primary T killer naive cells fromperipheralblood | blood |
| 38 | chr2:86094800-86105400 | Weak transcription | Primary T helper memory cells from peripheral blood 2 | blood |
| 39 | chr2:86094800-86106000 | Weak transcription | Primary T helper naive cells from peripheral blood | blood |
| 40 | chr2:86095000-86102000 | Strong transcription | Primary T cells from cord blood | blood |
| 41 | chr2:86095000-86103400 | Weak transcription | Primary T helper 17 cells PMA-I stimulated | -- |
| 42 | chr2:86095200-86098800 | Weak transcription | Primary B cells from peripheral blood | blood |
| 43 | chr2:86095200-86102600 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
| 44 | chr2:86095200-86102800 | Weak transcription | Primary T helper cells PMA-I stimulated | -- |
| 45 | chr2:86095400-86104000 | Weak transcription | A549 | lung |
| 46 | chr2:86096200-86108400 | Genic enhancers | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 47 | chr2:86096400-86099000 | Weak transcription | Pancreas | Pancrea |
| 48 | chr2:86096800-86107600 | Enhancers | Brain Hippocampus Middle | brain |
| 49 | chr2:86097000-86104400 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 50 | chr2:86097200-86099800 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
