Variant report

Variant	rs58515922
Chromosome Location	chr2:86173037-86173038
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr2:86167637..86170069-chr2:86171066..86173943,2	K562	blood:
2	chr2:86103419..86105731-chr2:86172011..86174482,2	MCF-7	breast:

Extended variants
information (count: 28 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:28)

rs_ID	r²[population]
rs11891333	0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs17026666	1.00[AMR][1000 genomes]
rs17026701	1.00[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs17026729	1.00[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs2012798	0.89[ASN][1000 genomes]
rs4292089	0.88[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs55716007	0.88[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs55967160	0.91[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs57150081	1.00[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs57178127	1.00[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs58672934	0.96[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs58686314	1.00[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs59968392	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs60981340	0.81[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs61477982	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs6547646	0.96[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs6705122	0.81[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6717839	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs6718632	0.84[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6747424	0.81[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6759489	0.84[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs735737	0.81[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs73943909	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs73943920	0.89[ASN][1000 genomes]
rs73945524	1.00[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs73945530	1.00[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs73945535	1.00[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs7570836	0.88[AMR][1000 genomes];0.97[EUR][1000 genomes]

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:86171800-86173400	Enhancers	Liver	Liver
2	chr2:86172800-86176200	Weak transcription	HepG2	liver

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