The 2.0 version of rSNPBase

Variant report

Variant rs57150081
Chromosome Location chr2:86082482-86082483
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:96 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:86066000-86106200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr2:86066400-86091400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
3 chr2:86067000-86099000 Weak transcription Gastric stomach
4 chr2:86067200-86087000 Weak transcription Fetal Brain Male brain
5 chr2:86067400-86084800 Weak transcription Ovary ovary
6 chr2:86067600-86086200 Weak transcription Fetal Brain Female brain
7 chr2:86071800-86096200 Weak transcription Pancreatic Islets Pancreatic Islet
8 chr2:86072000-86090400 Strong transcription Cortex derived primary cultured neurospheres brain
9 chr2:86072000-86096800 Weak transcription Psoas Muscle Psoas
10 chr2:86073000-86083600 Weak transcription HUES6 Cell Line embryonic stem cell
11 chr2:86074000-86089800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
12 chr2:86074600-86089600 Weak transcription NH-A brain
13 chr2:86074800-86086200 Weak transcription HSMM muscle
14 chr2:86075400-86114000 Weak transcription Aorta Aorta
15 chr2:86076000-86090400 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
16 chr2:86077200-86088600 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
17 chr2:86079000-86092000 Weak transcription Esophagus oesophagus
18 chr2:86079200-86090400 Strong transcription A549 lung
19 chr2:86079200-86092000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
20 chr2:86079200-86092600 Weak transcription Colon Smooth Muscle Colon
21 chr2:86079200-86092800 Weak transcription Stomach Smooth Muscle stomach
22 chr2:86079400-86083200 Weak transcription HMEC breast
23 chr2:86079600-86087800 Weak transcription Osteobl bone
24 chr2:86079600-86106200 Weak transcription Brain Germinal Matrix brain
25 chr2:86080000-86091600 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
26 chr2:86080200-86088600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
27 chr2:86080400-86085000 Strong transcription Foreskin Melanocyte Primary Cells skin01 Skin
28 chr2:86080400-86093000 Weak transcription HSMMtube muscle
29 chr2:86080800-86093600 Weak transcription K562 blood
30 chr2:86081000-86082600 Weak transcription Liver Liver
31 chr2:86081000-86084800 Weak transcription Fetal Stomach stomach
32 chr2:86081000-86086000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
33 chr2:86081000-86086200 Strong transcription Brain Angular Gyrus brain
34 chr2:86081000-86088000 Weak transcription Fetal Intestine Large intestine
35 chr2:86081000-86112400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
36 chr2:86081600-86082600 Enhancers Primary T cells fromperipheralblood blood
37 chr2:86081600-86082600 Weak transcription Brain Hippocampus Middle brain
38 chr2:86081600-86082600 Weak transcription Brain Inferior Temporal Lobe brain
39 chr2:86081600-86083000 Enhancers Primary T killer naive cells fromperipheralblood blood
40 chr2:86081600-86083000 Genic enhancers Fetal Thymus thymus
41 chr2:86081600-86083800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
42 chr2:86081600-86084000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
43 chr2:86081600-86084200 Weak transcription Fetal Adrenal Gland Adrenal Gland
44 chr2:86081600-86084200 Weak transcription Skeletal Muscle Male skeletal muscle
45 chr2:86081600-86084800 Weak transcription Skeletal Muscle Female skeletal muscle
46 chr2:86081600-86085000 Weak transcription Lung lung
47 chr2:86081600-86085000 Weak transcription Sigmoid Colon Sigmoid Colon
48 chr2:86081600-86086000 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
49 chr2:86081600-86088200 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
50 chr2:86081600-86088200 Strong transcription Fetal Muscle Leg muscle

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Last update: Aug 31, 2015