Variant report

Variant	rs12098926
Chromosome Location	chr11:83375786-83375787
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:83371070..83373099-chr11:83374916..83376887,2	K562	blood:

Extended variants
information (count: 26 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:26)

rs_ID	r²[population]
rs11233708	0.81[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs11233709	0.83[ASN][1000 genomes]
rs11233714	0.89[ASN][1000 genomes]
rs12223386	0.81[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs12226177	0.81[AMR][1000 genomes];0.84[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1868892	0.88[AMR][1000 genomes];0.94[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2443455	0.89[AFR][1000 genomes];0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs587103	0.82[ASN][1000 genomes]
rs604276	0.97[AFR][1000 genomes];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs604787	0.95[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs617859	0.82[ASN][1000 genomes]
rs633338	0.81[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs641737	0.88[ASN][1000 genomes]
rs645596	0.86[AMR][1000 genomes];0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs650206	0.92[ASN][1000 genomes]
rs6592137	0.84[AMR][1000 genomes];0.82[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs6592138	0.85[AFR][1000 genomes];0.88[AMR][1000 genomes];0.86[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs668025	0.93[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs688414	0.87[ASN][1000 genomes]
rs7106608	0.81[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs7109939	0.86[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs7125165	0.92[ASN][1000 genomes]
rs7927393	0.89[AMR][1000 genomes];0.93[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7928379	0.96[AFR][1000 genomes];0.94[AMR][1000 genomes];0.94[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7946175	0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7952084	0.96[AMR][1000 genomes];0.94[EUR][1000 genomes];0.99[ASN][1000 genomes]

No data

Chromatin state (count:17 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:83372200-83376400	Weak transcription	HUES64 Cell Line	embryonic stem cell
2	chr11:83373400-83377400	Weak transcription	iPS-20b Cell Line	embryonic stem cell
3	chr11:83373800-83377000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
4	chr11:83374000-83377400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
5	chr11:83374000-83379200	Weak transcription	Brain Angular Gyrus	brain
6	chr11:83374000-83386600	Weak transcription	Brain Anterior Caudate	brain
7	chr11:83374000-83387000	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
8	chr11:83374600-83378600	Weak transcription	HUES48 Cell Line	embryonic stem cell
9	chr11:83374600-83387200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
10	chr11:83374800-83377200	Weak transcription	HUES6 Cell Line	embryonic stem cell
11	chr11:83374800-83379200	Weak transcription	Brain Inferior Temporal Lobe	brain
12	chr11:83374800-83392000	Weak transcription	Breast Myoepithelial Primary Cells	Breast
13	chr11:83375400-83376000	Enhancers	Fetal Brain Male	brain
14	chr11:83375400-83378400	Weak transcription	Brain Cingulate Gyrus	brain
15	chr11:83375600-83378400	Weak transcription	Brain Hippocampus Middle	brain
16	chr11:83375600-83379200	Weak transcription	Brain Substantia Nigra	brain
17	chr11:83375600-83384400	Weak transcription	Fetal Heart	heart

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